| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_1125 |
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| Symbol | |
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| ID | 3968312 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | + |
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| Start bp | 1458451 |
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| End bp | 1459188 |
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| Gene Length | 738 bp |
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| Protein Length | 245 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 637920196 |
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| Product | 5'-3' exonuclease |
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| Protein accession | YP_526599 |
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| Protein GI | 90020772 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3665] Uncharacterized conserved protein |
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| TIGRFAM ID | [TIGR03425] urea carboxylase-associated protein 2 |
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Plasmid Coverage information |
| Num covering plasmid clones | 44 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCTGAATA TTTTAAATCC AACAGATTCA ACAAGCCGTT ACACCACCAA TATAGATGGC
GGCAGTCATT GGAGTGTACT GGTAAGGCGC GGCGTGAACC TTCGTTTAAC CGACCTAGAG
GGTGGTGCAA ACGTAGGGAT GATGTTTTAC AACCCCGTAT GGTTAAGCGA GCGCTACAAC
GCACCGGATA CACTCAAATG CCAGCACACT TTTAAGTTAA CCCAAGGTAA TTGTTTGTAT
TCAGATATGG GCAGAATATT TTGCTCAATT ATCGAGGATA GTTTTGGCTG GCATGAAACC
ATGTGCGGCA ATGCGCATGC GCAGCACGTA AGCAAAAAGT GGGGCGGGCG AGATTACCAA
TCAGATCGCA ATGCTTGGCA GCAAAACGGC TACGATAGCT TTTTGGTCGA ATTGGCCAAA
TACGGCCTAG ACCGCACAGC AATGGTCGCC AATGTAAATT GGTTTAGCGA AGTGAGTGCC
GATGATAACG GCAACCTTAA ACTAACCCGT CAATCCAAAG CTGGTGATGC AGTTACATTG
CGTTTCGAGA TGGACACTCT TGTGGTACTT CACACTTGCC CGCACCCAAT GAACAGCGAA
GCAACCTATC CTAAAAAGCC TATTCGCTTG GAAATGTTTA AGGGGGAACC GGTAACAGAA
CAAGACGAAT GCTTAAATCA CTGCGCAGAA AATCGGCGTG GCTTCGAAAA CAATGCATTG
TATTTATTAG GCGCGTAG
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| Protein sequence | MLNILNPTDS TSRYTTNIDG GSHWSVLVRR GVNLRLTDLE GGANVGMMFY NPVWLSERYN
APDTLKCQHT FKLTQGNCLY SDMGRIFCSI IEDSFGWHET MCGNAHAQHV SKKWGGRDYQ
SDRNAWQQNG YDSFLVELAK YGLDRTAMVA NVNWFSEVSA DDNGNLKLTR QSKAGDAVTL
RFEMDTLVVL HTCPHPMNSE ATYPKKPIRL EMFKGEPVTE QDECLNHCAE NRRGFENNAL
YLLGA
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