| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_1123 |
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| Symbol | |
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| ID | 3968310 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | + |
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| Start bp | 1456796 |
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| End bp | 1457611 |
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| Gene Length | 816 bp |
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| Protein Length | 271 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 637920194 |
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| Product | ABC transporter, permease protein |
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| Protein accession | YP_526597 |
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| Protein GI | 90020770 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0600] ABC-type nitrate/sulfonate/bicarbonate transport system, permease component |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 43 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAAGAC TCATCAATAA ACGCCCATCT AAACCCTTGG CTGTATTTTT AGGAATATTC
CCATTCTTAA TTTTGTTGTT TTTGTATCAG GTTGGGTCCG ATGCGCGTAA AGCAGAAAAT
GAGCGCGATA AATTACTGCC CAGTTTTTCT GAAATACACC ACGCGATAGA TCGCCTAGCT
TTCACACCGA GCAAACGCAC CGGTGAGTAT GTGTTCTGGC AAGATACAAA AAGTAGTTTA
AAGCGAATGT TAATGGGGCT GGCCATAGCC GCTCTTATAG GGTTAACAAT AGGCCTGTTA
ACCGGCGCAA TTCCCATGCT GGGGGCAAAC CTCACCCCTT TAGTTACCGC AATATCGTTA
ATACCGCCCA TGGCCATACT GCCTATTTTA TTTATTGTGT TTGGTTTGGG CGAGTTATCT
AAGGTGGTAT TAATTGTAAT AGGCATTGCG CCATTTATGA CGCGAGATAT ATACCAACGC
ACCAAAGAGC TGCCGCGCGA GCAATTAGTT AAAGCGCAAA CATTGGGGGC GCATTCGGGC
CAAATAATTG TGAGGGTATT GTTGCCCCAA ATACTGCCCA GGTTAATCGA TGCGGTGCGT
TTAAGTTTAG GCTCGGCGTG GTTGTTTTTA ATTGCCGCCG AGGCAATAGC ATCTACCGAT
GGCTTAGGTT ACCGAATTTT CTTGGTGCGG CGTTACATGT CTATGGATGT CATTCTGCCC
TACGTTATTT GGATAACCTT CCTAGCCTTT TTATTGGATT GGATGTTGGT GCGCACCAGC
AAAACATTTT TCCCTTGGTA TCACGTACAA AAATAG
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| Protein sequence | MKRLINKRPS KPLAVFLGIF PFLILLFLYQ VGSDARKAEN ERDKLLPSFS EIHHAIDRLA
FTPSKRTGEY VFWQDTKSSL KRMLMGLAIA ALIGLTIGLL TGAIPMLGAN LTPLVTAISL
IPPMAILPIL FIVFGLGELS KVVLIVIGIA PFMTRDIYQR TKELPREQLV KAQTLGAHSG
QIIVRVLLPQ ILPRLIDAVR LSLGSAWLFL IAAEAIASTD GLGYRIFLVR RYMSMDVILP
YVIWITFLAF LLDWMLVRTS KTFFPWYHVQ K
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