| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_1121 |
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| Symbol | |
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| ID | 3968308 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | + |
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| Start bp | 1453046 |
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| End bp | 1454617 |
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| Gene Length | 1572 bp |
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| Protein Length | 523 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 637920192 |
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| Product | hypothetical protein |
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| Protein accession | YP_526595 |
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| Protein GI | 90020768 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3934] Endo-beta-mannanase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.258088 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGTGATG CGGTAGTTTG CTATAACTTT TACCTTATCG TTGTTAGAAT GAGTGTAACC
GTTTACATTT GGCGTCTAAT TCATAAAAAG GGGAATACTG TGATTCTAAA GTTTCTAGGT
TTGGCCGTAA CGTTCATGTG CGCAGGGTCG GCACTGGCAT TGGAGAACTT TATTACTCGT
GACGGCCATC GATTGCTGGA TGGAGAGCAG GAGTTTCGCT TTGCAGGTAT TCACTTCCCC
GAAATGCACC GTATAGAAAA TGACGCTGCT GGAGTGTGCA AATACGACCC CAGAGGCTGG
GGGCAGCATT TTCAATGGCC CACCGAAGAC GAGCAAGAAA ACTGGGTGAA AGCCGCTGTG
CGCACGGGCC ATAAGGCCAT GCGGGTATAT GTGCTGTCGG TGCAGCAAGC CAGCGACCAA
GCCTGCGACA GGCAAACCCA TATTCTTGCA CCCGCCGAGC CCGGTGGCAT GCCCCGTTTA
AGTGAGGCGG CCATGGTGCC TTACGACCGC ATGATTGCGC TTTCTGATAA ATACGGCCTG
CGCTTAATTT TACCTTTTAT AGATCAATGG CCATGGTGGG GCGGGCGTGA GCAATTAGCT
GCGTTTTATA ATGAGAAGCC AGAAGACTTC TACGACACCA GCAGTAAAAC CTATGCCGCA
TACCAAAGTA TTATCAAACA GGTGTTAACC CGCAAAAACA CCTTTACTGG CCGCGAGTAC
CGCGACGAAA AAGCGATTAT GGCGTGGGAG ACCGGCAACG AATTAAAAGA TACAACGGCG
GATTTCTTAA GTAAAACAGC CGGTCTCATT AAATCGTTAG ATAAAAATCA TTTGGTGGTA
GACGGCACCT ATAAAGCGAT TAACGATTTT GCCCTTGCCG ACCCCAATGT AGATATTATT
TCAAATCACT ATTACGAAAA TGCAGGCAAC CTTTCGCCGC AAACCGTGCG CGCAGACCTA
GAAGCTATAG GTGGTAAAAA AGCGTATTTA ATAGGTGAGT TTGGTCTACT CGACATTGAG
CGTTTGCAGC AAATAATGGA TGCTGCAGTT AATGAAAATG TGAATGGTGC CAAAACCGTA
GGCACCTTTA TTTGGGGGGG GCGAGGTCAT AGGCACAGCG GTGGCTTTTA TTGGCATTTA
GAGCCTGCCA ACAATAAAAC CTACAGTTAC CATTTACCAG GTTTCAAGGA AGGGGCGCAC
AACCAAGAAA TGCAAGTTGT GGATATGGTG CGGTTGGCAG CCGCGCAAAT GAATGGCGAG
AAAAAAATGG CACCCCTACC GGTACCAGAA GCGCCAATAT TACGAGTGAT ATACCGCGCA
GATAATGTTC GTTGGATGGG CGCGCCCACC GGCAGAAGTT ATCGCGTTGA GCGCGCAGAA
AAAATAGATG GTAAATGGAA AGTCATTGGT AAAAATATTT CCGATGGCAA AAATAAATTC
GACCCCAACA CCGATGCACT GTTTAGCGAT ACCGATAAAC TACAAAAAGG CAAAACCTAT
TACTATCGCG TTATTGCCAT AAATGAATCA GGCGAGTCGC CGCCTTCTAA TATTCGCGCT
TTAACTTATT AA
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| Protein sequence | MRDAVVCYNF YLIVVRMSVT VYIWRLIHKK GNTVILKFLG LAVTFMCAGS ALALENFITR
DGHRLLDGEQ EFRFAGIHFP EMHRIENDAA GVCKYDPRGW GQHFQWPTED EQENWVKAAV
RTGHKAMRVY VLSVQQASDQ ACDRQTHILA PAEPGGMPRL SEAAMVPYDR MIALSDKYGL
RLILPFIDQW PWWGGREQLA AFYNEKPEDF YDTSSKTYAA YQSIIKQVLT RKNTFTGREY
RDEKAIMAWE TGNELKDTTA DFLSKTAGLI KSLDKNHLVV DGTYKAINDF ALADPNVDII
SNHYYENAGN LSPQTVRADL EAIGGKKAYL IGEFGLLDIE RLQQIMDAAV NENVNGAKTV
GTFIWGGRGH RHSGGFYWHL EPANNKTYSY HLPGFKEGAH NQEMQVVDMV RLAAAQMNGE
KKMAPLPVPE APILRVIYRA DNVRWMGAPT GRSYRVERAE KIDGKWKVIG KNISDGKNKF
DPNTDALFSD TDKLQKGKTY YYRVIAINES GESPPSNIRA LTY
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