| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_1119 |
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| Symbol | |
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| ID | 3968306 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | - |
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| Start bp | 1449526 |
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| End bp | 1450635 |
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| Gene Length | 1110 bp |
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| Protein Length | 369 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 637920190 |
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| Product | RND family efflux transporter MFP subunit |
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| Protein accession | YP_526593 |
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| Protein GI | 90020766 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.0000000000371819 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAAACT TTTTACTTAC ACTACTGGGC CTAGTAATTG TTGTTGGCCT AATTGCAGGC
ATAAAAGCAT CGCAAATATT CGCAATGATA GGCGCAATGG AAACCATGGC CATGCCCCCT
TCTGTGGTTG CCTCTTCGCC AGTAGAGCAG CAAGAGTGGG AGCAAACGCT ATCGTCGGTT
GGCGACCTTG AAGCAGTGCA AGGTGTGGTG GTAGGTGCAG ACCTACCCGG TCGCGTTGTT
AAGCTAGAGT TCACCCCAGG CGCTTACGTT GAAGAAGGTG CACCGTTAAT TCAGCAGGAT
ATATCATCCG AAAAAGCGCA ACTGCGCGCG GCCGAAGCCG CTGTTGCTTT AGCTAAAAGC
AATTTAGATC GCTCTAGCGA ATTGCTGCGT AAACAAGTGG TGTCTAAATC CGATTTTGAC
GCTGCCGATG CCAATTACAA ATCCGCAGTG GCACAAGCCG ATAACATTCG CACCACTATT
CAAAAGAAAA CCATTACCGC ACCGTTTGCG GGGCGTTTAG GTATTCGCAT GGTTAACTTG
GGCCAAGATT TAGCAGCTGG CACCCCAATT GTTACGCTGC AAACCATGGA CCCAATATTT
GTAAACTTCT ACCTACCCCA ACAGGAATTA CCCAAAATCA CCCTGGGTGC AGAAGTTCGC
TTAACCACAG ATGCCGTGCC AGGTAAAAAC TTTACCGGTG CAATTACCGC GATAAACCCC
GAAATTGACC CAGCTACTCG CTCGGTGCGC GTGCAAGCCA CTTTAAAAAA TGACAGCAAT
GAGCTGTTGC CAGGTATGTT TACCAAAGTA AAAGTCATCA TGCCCGAGAA AAGAAAAGTG
CTAGCAGTGC CCCAAACGGC TATTGCTTAC GCCACTTACG GCGACTCGGT ATTTGTAGTG
ACTAAAGAGA ACGACGCTCT AGTGGCCAAG CAACAGTTTG TGCGCTTAGG CACCACACTG
GGCGACTACG TGGAAGTTAC CGCAGGCGTT ACAGCAGAAG ACGAAGTGGT TAGTTCCGGT
GTTTTCAAAT TACAAAATGG CGCACCTATT TCGATTAACA ACGAAGTACA GCCCAAATAC
GAGCAAGCAC CAACACCTGA CAACTCGTAA
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| Protein sequence | MKNFLLTLLG LVIVVGLIAG IKASQIFAMI GAMETMAMPP SVVASSPVEQ QEWEQTLSSV
GDLEAVQGVV VGADLPGRVV KLEFTPGAYV EEGAPLIQQD ISSEKAQLRA AEAAVALAKS
NLDRSSELLR KQVVSKSDFD AADANYKSAV AQADNIRTTI QKKTITAPFA GRLGIRMVNL
GQDLAAGTPI VTLQTMDPIF VNFYLPQQEL PKITLGAEVR LTTDAVPGKN FTGAITAINP
EIDPATRSVR VQATLKNDSN ELLPGMFTKV KVIMPEKRKV LAVPQTAIAY ATYGDSVFVV
TKENDALVAK QQFVRLGTTL GDYVEVTAGV TAEDEVVSSG VFKLQNGAPI SINNEVQPKY
EQAPTPDNS
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