Gene Sde_1117 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSde_1117 
Symbol 
ID3968304 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharophagus degradans 2-40 
KingdomBacteria 
Replicon accessionNC_007912 
Strand
Start bp1445728 
End bp1446078 
Gene Length351 bp 
Protein Length116 aa 
Translation table11 
GC content41% 
IMG OID637920188 
ProductFHA domain-containing protein 
Protein accessionYP_526591 
Protein GI90020764 
COG category[T] Signal transduction mechanisms 
COG ID[COG1716] FOG: FHA domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.0556817 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCCTAA TAGCACAGTT AGTTGACGAT GTAATGGTAC ATAAGTTTGA GCTCCGTAAA 
GAAGAAGTGC TGCTTGGGCG CCACCCAGAA AACGACATAG TGGTAGACGA TAGCGCCGTA
AGCAGTTACC ACGCTGCCAT TACGTTAGAG AAAAATAAAG ATTTCCCTGA GTTCTTAGAG
TTTTATGTAA AAGACTTGGG TAGTACTAAC GGCACATTTA TTAATGATAC CCCTGTTGAA
GGGCGGCAGC GTTTACACCA CAACGATATT ATTCGTATTG CGTGGAATAA TTTTAAATTT
GTAGACCCTA AAGAAGCCGA TTTAGAAAAA ACCGTACATA TGCTGAAATA G
 
Protein sequence
MALIAQLVDD VMVHKFELRK EEVLLGRHPE NDIVVDDSAV SSYHAAITLE KNKDFPEFLE 
FYVKDLGSTN GTFINDTPVE GRQRLHHNDI IRIAWNNFKF VDPKEADLEK TVHMLK