Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sde_1116 |
Symbol | |
ID | 3968303 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharophagus degradans 2-40 |
Kingdom | Bacteria |
Replicon accession | NC_007912 |
Strand | + |
Start bp | 1443224 |
End bp | 1445686 |
Gene Length | 2463 bp |
Protein Length | 820 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 637920187 |
Product | Serine/threonine protein kinase-like |
Protein accession | YP_526590 |
Protein GI | 90020763 |
COG category | [K] Transcription [L] Replication, recombination and repair [R] General function prediction only [T] Signal transduction mechanisms |
COG ID | [COG0515] Serine/threonine protein kinase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACCGCGC TAAAGCAACG TTGGGCCAAA GCCATATGGC GAGCAGTATT GGCGTTTAGC ACCCGAGGCA TGGTGGTGGT GCTGTTGCTT GGCTTTTGTT TGCTGCCCAC ATCTTTTACG CGTTTCGCCC CCTTAGATCT TGTAACCGCA AAGCTGGCTA GCTACTTAGT AGAAGCACCC CAAACCTTGC GCGGCGTCAC CGTTATAGAG GTGCCCGAGC GATCCATGCA ATTGTGGGCG TCAGATATTC ATCGCGCTGG CCCGCTCAGC TCCTTGCTTA GCAATGTATT GCACGGGCAG GCGGGCTTTG TAACCTTGGT GTTACCTCAA CCTATCGATT TTCCAACTGG CCCTGCGAGC GAGCTTTTAC AAGAGTTGGC GTTAGATAAC CCGCAGGCCC AAACACTGGT AGACCGGCAA GCTTATTTAG CCAGTTTGCT TGCCGACAAA CGTCTTGTTA TTGGTGTGTC ATCATCGCGT CAACCGTGGT TACCTGCAGG CGCAAAACCC ATCCCTATTG TTGCTAGTGA TACGCCTATT TGGCAGCACG AAACATTACA GCGTTGGCTT TGGGGAAGCC CACAAAATTA CGGTGCAGCG CTAGATAGCC GGCCGAGTGT CGAGCACTTC CCCGTATATG CCGCGTACAA TGGCATATAC AGGCTGGCTT ACCAGCAAGA CTCTGAGCAG GTGTACCCTC ACTTACTGCT GCACCAATTA AAAGAAAAGC AGGCGCAAGT ATGGAGTGAT AGCAAAGGCT TTCCTTACCG CTGGCAGCCG GCTGATGGCT TTGTGGTGGG CAATCACACT ATTCACGCAT CGGCATCGGC GGGGATTGTG CCATTGTGGG GCCTAACTGA GCGTATGACC CCCTATATTG AACGGTTAAG CTTGGAAGAA GGGTTAGCGC GTGGGGCCTT TCCTGAGCAG GTTTATATTG TGTCCGACGC CGACAGCACG GCAATTCCAC TTATATTGTC TGCTGCGAGC TTAAGTAAAG GTGATTACCT GTGGCAGCCG CTGTGGGTGG CGCCAAGCTT AAAATTATTT ATGCTGCTGG CTTTGTGCTA CTTAATTTTT ATTATGCCGC GTTTGCGTGT TGCAACCGGT GTATGGATAA CCTCGGCCCT AATAATTTTT GCTTTTGTTA GCGCAACGGT GTTGGGGGCG GTACGGCATA TTTGGGTTCC CGCCACAACG GTATCGCTGC TACTCGCTTT TGGTCATTTA GGGGTATTAA TTTGGCGGGA TAAACGAACT AAGTGGCAAG CCCTTACCGA GCAGGCAGAA AAAGCATCGG TATTGCAGGC TAGCATTCAT CTAGCGAATG GTGCTTTAGA TGATGCCTAC GATGTGCTGC AAGACTGCAA GGCGTCGGGT GAAGCGTTTA GTTACCTGTA TGAGCTTAGT GGCCTATACG CGTCTAAACG CAATTACGAG CGCGCAATTG CCACTTTAGA TTCACTCATT GAACGCGCGC CCAATTATAA AGATGCCAAG CAAAAACGCA GCGCCATTGC CAGCGTGCAT CGCAGCCAGC AAAACCAATT AGAAAAAACC ACATTGATGA TAGACGCAAC TGTGGCTATT GATGCGCATA AAGTGGATCG CCCAGTGCTT GGCCGTTACG AAATTCGCAG CGCCTTAGGT AAAGGGGCAA TGGGGCAAGT GTACTTGGGG TTTGACCCGC GCATTGCACG TCAAGTGGCC ATAAAAACAT TAAATTATAA TCAGTTTGAT GCAGCAGCCC TGCCGGATAT TAAGCAGCGT TTTTTTCGCG AAGCAGAGGC GGCAGGTAGG TTAAACCACC CCAATATAGT GGCAGTTTAT GACCTAGGTG AAGAGCCAGA CCTAGCCTTT ATTGCAATGG ATTATGTTGA TGGCAGCCCG TTAAGCGCAT TTGTGAATGC CGACAATCTA TTACCTGTTT TTGAAGTGTA TCGTGTTATA CATGATGTGG CGGTCGCACT GGAATATGCC CATCAACATC AAATAGTGCA CCGCGATATA AAGCCCGGCA ATATTATGTA CCGGCCTGTG CCTTATCACC TTAAGGTGGC CGATTTTGGT ATAGCGCGCT TAACCGATAA TTCGCAAACT ACCACAGGCG AAATTCTTGG TAGCCCGCTG TATATGGCGC CGGAGCAGTT AAAAGGCAAA AAGGTAGATT ACGCTGCAGA CTTGTTTAGT TTAGGGGTTA CCTTTTACCA GTTGTTAAGT GGCGAGTTAC CGTTTAAAGG CGACAACCTT GCGAGCTTAA CCTACGAAAT TATTCACGGT AAGCATAAAA GCGTGCGCCA AGTGCGAAAA GATTTACCTA CAAGTGCAGC GCGTATTACC AATCAGGCGC TGCAAAAAGA TGCGAGTGAT CGTTACTCGT CCGCCGCAGA TATGGCCGCG GCGTTAAATA AAGCAATTAA ACGAGATTTT AGTCAAGAAG CCAAAAAAGC CGGCTTTGTT TAA
|
Protein sequence | MTALKQRWAK AIWRAVLAFS TRGMVVVLLL GFCLLPTSFT RFAPLDLVTA KLASYLVEAP QTLRGVTVIE VPERSMQLWA SDIHRAGPLS SLLSNVLHGQ AGFVTLVLPQ PIDFPTGPAS ELLQELALDN PQAQTLVDRQ AYLASLLADK RLVIGVSSSR QPWLPAGAKP IPIVASDTPI WQHETLQRWL WGSPQNYGAA LDSRPSVEHF PVYAAYNGIY RLAYQQDSEQ VYPHLLLHQL KEKQAQVWSD SKGFPYRWQP ADGFVVGNHT IHASASAGIV PLWGLTERMT PYIERLSLEE GLARGAFPEQ VYIVSDADST AIPLILSAAS LSKGDYLWQP LWVAPSLKLF MLLALCYLIF IMPRLRVATG VWITSALIIF AFVSATVLGA VRHIWVPATT VSLLLAFGHL GVLIWRDKRT KWQALTEQAE KASVLQASIH LANGALDDAY DVLQDCKASG EAFSYLYELS GLYASKRNYE RAIATLDSLI ERAPNYKDAK QKRSAIASVH RSQQNQLEKT TLMIDATVAI DAHKVDRPVL GRYEIRSALG KGAMGQVYLG FDPRIARQVA IKTLNYNQFD AAALPDIKQR FFREAEAAGR LNHPNIVAVY DLGEEPDLAF IAMDYVDGSP LSAFVNADNL LPVFEVYRVI HDVAVALEYA HQHQIVHRDI KPGNIMYRPV PYHLKVADFG IARLTDNSQT TTGEILGSPL YMAPEQLKGK KVDYAADLFS LGVTFYQLLS GELPFKGDNL ASLTYEIIHG KHKSVRQVRK DLPTSAARIT NQALQKDASD RYSSAADMAA ALNKAIKRDF SQEAKKAGFV
|
| |