| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_1110 |
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| Symbol | |
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| ID | 3968297 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | + |
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| Start bp | 1438734 |
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| End bp | 1439510 |
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| Gene Length | 777 bp |
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| Protein Length | 258 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 637920181 |
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| Product | surface lipoprotein-like |
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| Protein accession | YP_526584 |
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| Protein GI | 90020757 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG2853] Surface lipoprotein |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 40 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAACATAT TTTTTAAGGA TAAATCTTTT ACACGTAGTT TGCGTGCGGC ATTCATCTTT
TTTGCTGTTG GCCTTGTAGG GTGCGCATCT AACCCGCAGC AGCAAAAAGA GTTGACCGAT
ACCACGGTTG AAAATATCGA CCCCCTAGAA GGCTTTAACC GCAAAATGTT TGCGTTTAAT
GATACTGTCG ATACATGGTT TTTGAAGCCC GTTGCAAAAG GGTACCGCTG GGTTGCTCCT
GCACCAGTGG AGGTGGGGGT GTCTAACTTT TTTGATAACC TAGGTGAGGT GAGCAACATC
GTAAACGATG CGCTGCAATG GAAATGGAAG CAAGCGAGTA ACGATACTGG GCGGTTGCTA
TTAAACACGA CGGTTGGGCT GCTGGGCACA ATCGATGTGG CGCGGCACGT TGGTTTGGAA
AAATCAGACG GTGAAGATTT TGGCCAAACA CTTGGTGTGT GGGGCGTAGA TGCTGGGCCG
TACCTAGTGC TGCCGCTAAT GGGGCCCGCA ACATTGCGCG ATGGATTGGC AAGACCTGTT
GATTACTATA CCGACCCCAT TAATTACATT GACGACGATG CTCATCGCTA TGGCTTAACG
GCCCTTGAAT TGGTTCAGTT GCGTGCAAAA CTGTTGGACG TAGAAGAACT AGCCGGCGGC
GGTGGTGACA AATACATTTT TATGAGGGAT GCGTATCTGC AACGCCGTGA ACACTTAGTG
AACGATGGTG CTGTGGAAGA TGACTTCGGC GGCGACTTTG GCGGAGATGG CTATTAG
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| Protein sequence | MNIFFKDKSF TRSLRAAFIF FAVGLVGCAS NPQQQKELTD TTVENIDPLE GFNRKMFAFN
DTVDTWFLKP VAKGYRWVAP APVEVGVSNF FDNLGEVSNI VNDALQWKWK QASNDTGRLL
LNTTVGLLGT IDVARHVGLE KSDGEDFGQT LGVWGVDAGP YLVLPLMGPA TLRDGLARPV
DYYTDPINYI DDDAHRYGLT ALELVQLRAK LLDVEELAGG GGDKYIFMRD AYLQRREHLV
NDGAVEDDFG GDFGGDGY
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