| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_1099 |
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| Symbol | |
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| ID | 3968264 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | + |
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| Start bp | 1411556 |
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| End bp | 1412728 |
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| Gene Length | 1173 bp |
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| Protein Length | 390 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 637920168 |
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| Product | response regulator receiver domain-containing protein |
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| Protein accession | YP_526573 |
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| Protein GI | 90020746 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.076371 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCTAAATC GTTTGCGCTG GGTTTCGGAT GATCGTTTAA AGGGGCGCTG CATTGAGTTG
GTTTTGGCTC AGGCTGGTAG CGCTTTTTTC TCTAGCGCTT TGGCTGGTGT TATTCTCATT
GCCGCTTTTT GGGCGCGCGT AGACCGTTGG GTTTTGGCTT TCTGGTTTTT CTCCTATTTT
TTTATAGCAT CATTGCGTGT CTGGCTTGCT GTTGTATATC GTCGTGCGCC TGAGTCTGTT
AATCCCGATA TGTGGTTTGC TGCTTATGCG GCTTGTGTGT TTTTGTCTGG ATTTGTCTGG
GGTGTTTTTC TTTTGCTGCT CTCGGTTAAT GCTGAGGGTG CTTACGCTGC GGTGTTGATG
GTTACGTTCA CTGCGTTGTT GGCGGCGGCG GTCACTGCTT ACTCTGTTTC ATTTCCGCTT
TATGTCTGTT TCTCCTTGCC GGTCGTGCTC CCTTTTTTGG TTAGTTTGTT GGTTGTTGGG
CAGCATATGC ATGGCATGGT TGCCGCGATT ATCTTGTGCT GGTATTTGTT TATGGTTTCA
ACGGCTAGGC GATTTAGTCA GTCTGCAATG CGTTCGCTTG GTTATCAGTA TGAGAATGTT
GGGTTGGTGC AGGAGCTGGA GGCTCAAAAC GAACGGGCAG AAAGGTTGGC TGGTGAGTTG
TTGGTTTTGT CTAACACTGA TGCGTTGACG GGTCTTTATA ATCGACGTTT TTTTAACGCT
CAAATTGAAA AGGAGTGGTT GCGGGCGTTG CGTACAGGGG AGTGCTTGAG TGTAATCATA
GTTGATATAG ATAATTTCAA GGGCTTCAAC GATTCGCTGG GGCATTTAGA GGGGGATAGG
TGTATCGCTC GGGTTGCGGG TGTGCTTAAA GGGGCGGTGC GAGAGGGAAC GGACTTTGCT
GTCAGGTATG GTGGGGAGGA GTTTGCGCTC ATTTTGGCGA ATACCTCTTT GGGCGCTGCT
TTGGGTTTGG CTGAAAGGTT GCGATCGGGG GTGGAGGGGT TGGCGCTTCC GCATCCTGAC
TCCGCTGTGT CGAAAGTGGT TACTGCGAGC TTTGGTGTTG CTGGTTGTGT TCCGCGGGTA
GAGGATCGTC TAGAGTTGTT TGTTGATATG GCGGATAAGG CGCTTTATCG CGCTAAGGGG
TTAGGGCGTA ACGCAGTTGT TTCGGCTGGT TAG
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| Protein sequence | MLNRLRWVSD DRLKGRCIEL VLAQAGSAFF SSALAGVILI AAFWARVDRW VLAFWFFSYF
FIASLRVWLA VVYRRAPESV NPDMWFAAYA ACVFLSGFVW GVFLLLLSVN AEGAYAAVLM
VTFTALLAAA VTAYSVSFPL YVCFSLPVVL PFLVSLLVVG QHMHGMVAAI ILCWYLFMVS
TARRFSQSAM RSLGYQYENV GLVQELEAQN ERAERLAGEL LVLSNTDALT GLYNRRFFNA
QIEKEWLRAL RTGECLSVII VDIDNFKGFN DSLGHLEGDR CIARVAGVLK GAVREGTDFA
VRYGGEEFAL ILANTSLGAA LGLAERLRSG VEGLALPHPD SAVSKVVTAS FGVAGCVPRV
EDRLELFVDM ADKALYRAKG LGRNAVVSAG
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