| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_1088 |
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| Symbol | |
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| ID | 3968252 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | + |
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| Start bp | 1390931 |
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| End bp | 1392235 |
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| Gene Length | 1305 bp |
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| Protein Length | 434 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 637920156 |
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| Product | tyrosyl-tRNA synthetase |
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| Protein accession | YP_526562 |
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| Protein GI | 90020735 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0162] Tyrosyl-tRNA synthetase |
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| TIGRFAM ID | [TIGR00234] tyrosyl-tRNA synthetase |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.200739 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTGGTG TGGATACTGG ATTGTTAGCA GATTTGGAAG CTCGCGGTCT TATTGCGCAA
ATGACGGGCG ATGATCAATT GGCGGAGCAT CTTTCGACCT CTCGCACCTT GTATTGTGGC
TTCGACCCCA CTGCCGACAG CTTGCATATT GGCAGCCTTG TGCCATTGCT AACGCTTAAG
CGTTTTCAGA TGGCAGGCCA CAAGCCCTTG GCTCTTGTTG GTGGCGCCAC GGGCCTTATT
GGCGACCCTA GCTTTAAAGC GCAAGAGCGC AAATTAAACA CGCCAGATAT TGTGGCGGGT
TGGGTGGATA AGCTAAAGGC GCAAGTATCA CAATTTATTG ATTTTGATAG CGGCGAAAAC
GTGGCAGAAG TAGTCAATAA CCTAGATTGG ATTGGCTCCG TTAATGTGCT GGATTTTCTG
CGCGACGTGG GCAAGCACTT TTCTATTAAT AATATGATTC AGAAAGAATC CGTTAAGCAG
CGTATAGATC GCGAAGGCGC GGGCATCTCT TTTACTGAAT TCACCTATAT GATTTTGCAG
TCCTACGATT TTGCCGAGCT GTACAAGCAA AATAATTGTA CATTGCAAAT TGGTGGCTCA
GATCAGTGGG GCAATATTAC CGGTGGTATC GACTTAGCGC GCCGTATGTA CAGTGGTCAA
ACCTTTGGGT TAACGCTGCC TTTGGTGACT AAATCTGACG GCACTAAGTT TGGTAAAACC
GAATCTGGCA CCATTTGGTT AGACCCATCT AAGACCTCGC CTTACGCGTT TTATCAATTC
TGGTTGAACT CGGCTGACGC CGATGTATAT AAATTCTTGC GCTACTTTAC CTTTTTAACG
CCAAAAGAAA TTGACGATAT TGAAGCGGCA GATGCAGCAG CGCAAGGGCG GCCACAGGCG
CAGGGTATTC TTGCCAAGGA AGTCACTCGT CTGGTGCACG GCGAAGAAGG TTTGGTAGCT
GCCGAGCGCA TTACTGCGTG TATGTTTAAT GGCACATTGG CCGATTTGAG TGAAACAGAT
TTGGAGCAGC TAAAATTAGA TGGCTTGCCT GCAAGCGATT TGGATGTTGG CGCCATTGGC
GATACGCCTT TAACCACACT GCTAACCGAT TGCGGCATGG CCAAAGCGGG CCGCGAAGTG
AAAGATGCGC TAGGCCGCAA TGCGGTGTTA ATAAACGGCG AAGCCAAAGG GGCGGAACAT
AATATGCAAG CTGCTGAATG CTTCGCGAAA GAACATGCGT TATTTGGTCG CTTCTTTTTG
GTGAAATTAG GTAAAAAGAA AAACCACTTA TTTGAAATTG TTTAA
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| Protein sequence | MSGVDTGLLA DLEARGLIAQ MTGDDQLAEH LSTSRTLYCG FDPTADSLHI GSLVPLLTLK
RFQMAGHKPL ALVGGATGLI GDPSFKAQER KLNTPDIVAG WVDKLKAQVS QFIDFDSGEN
VAEVVNNLDW IGSVNVLDFL RDVGKHFSIN NMIQKESVKQ RIDREGAGIS FTEFTYMILQ
SYDFAELYKQ NNCTLQIGGS DQWGNITGGI DLARRMYSGQ TFGLTLPLVT KSDGTKFGKT
ESGTIWLDPS KTSPYAFYQF WLNSADADVY KFLRYFTFLT PKEIDDIEAA DAAAQGRPQA
QGILAKEVTR LVHGEEGLVA AERITACMFN GTLADLSETD LEQLKLDGLP ASDLDVGAIG
DTPLTTLLTD CGMAKAGREV KDALGRNAVL INGEAKGAEH NMQAAECFAK EHALFGRFFL
VKLGKKKNHL FEIV
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