| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_1084 |
|---|
| Symbol | |
|---|
| ID | 3968248 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Saccharophagus degradans 2-40 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007912 |
|---|
| Strand | - |
|---|
| Start bp | 1386596 |
|---|
| End bp | 1387429 |
|---|
| Gene Length | 834 bp |
|---|
| Protein Length | 277 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 637920152 |
|---|
| Product | Serine O-acetyltransferase |
|---|
| Protein accession | YP_526558 |
|---|
| Protein GI | 90020731 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG1045] Serine acetyltransferase |
|---|
| TIGRFAM ID | [TIGR01172] serine O-acetyltransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.0116692 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 0.183103 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCACAAAA CAACACCCAT TTCGACCCTT GCGGACCAAA AGTCTCAGGA GTTGGACCCA
GTTTGGCAAA CCATCCGCCA AGAAACTCGG GAACAAGTGG AAGAAGAACC CGCATTGGCG
AGTTTCTTAC ACGCAACTAT TTTAAATCAC GATACACTAG AAAGCGCCTT GAGCTTTCAC
TTGGCCCACA AACTGGCAAA CCCTGCGATA TCGGCCCTGC AAATTCGTGA GATTATTGAA
GAGTCGATGA GCCACGACAG CTGCATTAGC GAAGCCGTGC GCGCAGATAT TCGCGCCGTT
TTCGATCGCG ATTCGGCCTG CAATTCGTAT GCATTGCCCT TTTTATACTT TAAAGGTTTT
CACGCGTTGC AAGCATTCCG CGTGGCCCAC TGCCTGTACA AACGCGGTCG TAAATCTTTG
GCCTATTTCT TACAAAGCCA TATTGCGCTT ACCTTTGGGG TAGACATTCA CCCTGCTGCG
CGCATAGGTA AAGGCATTAT GATGGACCAC GCCACAGGAA TAGTAATTGG TGAAACTACC
GTCGTCGAAG ATGATGTATC GCTAATGCAA GGCGTCACCC TTGGCGGAAC CGGCAAAGAA
GCCAGCGATC GTCACCCCAA AGTACGCAAG GGCGTGTTGG TGGGCGCCGG CGCTAAAATT
CTTGGCAATA TAGAAATTGG CGAAGGGGCA AAGGTAGGCG CTGGCAGTGT GGTGCTTGAA
GCTGTGCCTC CACACACTAC GGTTGTTGGT GTGCCTGCAC GCGTCGTCGG TGTACCACAG
TCGCAAAGCC CAGCACTAGA TATGAACCAC GGTATTCAGT GCGATTGCGA GTAA
|
|---|
| Protein sequence | MHKTTPISTL ADQKSQELDP VWQTIRQETR EQVEEEPALA SFLHATILNH DTLESALSFH
LAHKLANPAI SALQIREIIE ESMSHDSCIS EAVRADIRAV FDRDSACNSY ALPFLYFKGF
HALQAFRVAH CLYKRGRKSL AYFLQSHIAL TFGVDIHPAA RIGKGIMMDH ATGIVIGETT
VVEDDVSLMQ GVTLGGTGKE ASDRHPKVRK GVLVGAGAKI LGNIEIGEGA KVGAGSVVLE
AVPPHTTVVG VPARVVGVPQ SQSPALDMNH GIQCDCE
|
|---|
| |