| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_1070 |
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| Symbol | |
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| ID | 3968234 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | + |
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| Start bp | 1371340 |
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| End bp | 1371912 |
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| Gene Length | 573 bp |
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| Protein Length | 190 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 637920138 |
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| Product | transcription factor jumonji, jmjC |
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| Protein accession | YP_526544 |
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| Protein GI | 90020717 |
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| COG category | [S] Function unknown |
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| COG ID | [COG2840] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 36 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.269335 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACGACG ATGATGCCTT CTCAAACTTG TTGGGTGACG ATGTAACACC CCTTAAGGTT
GAGCCGAGGG TAGAGCTAAA ACGCAACGAT AATGTTGATA AACAACCCCG CAGGCAAGCG
GCGCAAGAGC AAGTGGAAAG TGCAGCAGAC CCGCTTGCTT CAGAGCCGGT TGAAATGGTG
GACCCGTTAG ACGTATTAAG CTTTATGCGG CCGGGTGTGC AGCATGGGGT GTTCCGCAAT
TTGCGGCTGG GTAAATACGC ATCTGATGCG CGGTTGGATT TACATCGCAT GACAGTCGAT
GAGGCTCGCC GTGCGGTGTA TCAGTTTATT AGAGATTGTT TGGCAAATGA TGTGCGTGCG
GCGCTTATTA CCCATGGTAA AGGTGAGGGG CGAGCACAGC CTGCGCTGCT TAAAAGCTGC
ATTGCTTATT GGTTGCCACA GTTAGATGAA GTATTGGCTT TTCATACGGC ACTCAAGCAG
CACGGTGGTT ACGGTGCAAC CTACGTGTTA ATTCGAAAAA GTGAATTAAA AAAGCAAAAA
ACCAGAGAGC AACACACTAA AAAACTTTAT TAG
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| Protein sequence | MNDDDAFSNL LGDDVTPLKV EPRVELKRND NVDKQPRRQA AQEQVESAAD PLASEPVEMV
DPLDVLSFMR PGVQHGVFRN LRLGKYASDA RLDLHRMTVD EARRAVYQFI RDCLANDVRA
ALITHGKGEG RAQPALLKSC IAYWLPQLDE VLAFHTALKQ HGGYGATYVL IRKSELKKQK
TREQHTKKLY
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