Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sde_1058 |
Symbol | rpsR |
ID | 3967852 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharophagus degradans 2-40 |
Kingdom | Bacteria |
Replicon accession | NC_007912 |
Strand | + |
Start bp | 1358167 |
End bp | 1358394 |
Gene Length | 228 bp |
Protein Length | 75 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 637920126 |
Product | 30S ribosomal protein S18 |
Protein accession | YP_526532 |
Protein GI | 90020705 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0238] Ribosomal protein S18 |
TIGRFAM ID | [TIGR00165] ribosomal protein S18 |
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Plasmid Coverage information |
Num covering plasmid clones | 43 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCACGTT TTTTCCGACG TCGTAAGTTC TGTCGTTTCA CTGCCGAAGG CGTGAAAAGC ATCGACTATA AAGATTTAGA TACTCTGAAA GCATACGTTT CTGAGACTGG TAAAATTGTA CCTAGCCGTA TCACTGGTAC AAAAGCTAAG TATCAGCGTC AATTGGCGAC CGCTATTAAG CGCGCTCGTT TTATTGCGTT GCTACCTTAC ACCGATTCTC ACGAGTAA
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Protein sequence | MARFFRRRKF CRFTAEGVKS IDYKDLDTLK AYVSETGKIV PSRITGTKAK YQRQLATAIK RARFIALLPY TDSHE
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