| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_1057 |
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| Symbol | rpsF |
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| ID | 3967851 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | + |
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| Start bp | 1357706 |
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| End bp | 1358164 |
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| Gene Length | 459 bp |
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| Protein Length | 152 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 637920125 |
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| Product | 30S ribosomal protein S6 |
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| Protein accession | YP_526531 |
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| Protein GI | 90020704 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0360] Ribosomal protein S6 |
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| TIGRFAM ID | [TIGR00166] ribosomal protein S6 |
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Plasmid Coverage information |
| Num covering plasmid clones | 42 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.66834 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCGTCATT ACGAAATCGT GTTCTTGGTC CACCCTGACC AAAGCGAACA GGTACCAGGT
ATGGTTGAAC GCTATACCGC AGCTGTTAAA GACAGCGGTG GTGCTGTTCA CCGTCTAGAA
GACTGGGGTC GCCGTCAAAT GGCTTACTCC ATCAACAAAA TCCACAAAGC GCACTACATT
CTTATGAATG TTGAGTGTGG CGAAGAAGTA TTGGAAGAGT TAACGACTAA CTTCCGTTAC
AACGACGCTG TATTGCGTAA CATGATTATC CGTTGTGATG AAGCCGTGAC TGAAGAGTCG
CCAATCATGA AAGCGGAAAA CGAGAGCCGC GAGCGCCGCA ACCGCGCCGA GCGTCGTGCT
CAAGAAGCCG AATCAGCTGC TGAAGAAGTT GAAGACGAAG AGTCTTTAGA CGAAGAAGCC
GATGATGAAT CATCTGAAGA CGAAAGCGAG GAGGCATAA
|
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| Protein sequence | MRHYEIVFLV HPDQSEQVPG MVERYTAAVK DSGGAVHRLE DWGRRQMAYS INKIHKAHYI
LMNVECGEEV LEELTTNFRY NDAVLRNMII RCDEAVTEES PIMKAENESR ERRNRAERRA
QEAESAAEEV EDEESLDEEA DDESSEDESE EA
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