| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_1050 |
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| Symbol | |
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| ID | 3967804 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | + |
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| Start bp | 1344090 |
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| End bp | 1347830 |
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| Gene Length | 3741 bp |
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| Protein Length | 1246 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 637920117 |
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| Product | hypothetical protein |
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| Protein accession | YP_526524 |
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| Protein GI | 90020697 |
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| COG category | [S] Function unknown |
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| COG ID | [COG5412] Phage-related protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGATCTG CAGCCACCAG CGCTGGCGCG CCCTTGCGCC TACAGGCCGC CGGAGCAAAG
GTATCCTCGC CTCACGACCC AGAGGAAAAA GAAGCGGATA ACACTGCCGA TAAAGTAATG
CGCATGGCCG TGCCAGACAG CCAAATTGCC AAGGTGCCAA CTAACACAGG TGGTGTATTT
AGAAAGCTTT TTAGGCGCCC TGCTAAACCC AACAATGAAG AAAAAATAAG CCGTAAAGCA
CCTAACGAAG AACCGCAGCT TAAAGAAGAT AAAGAGCTTC AGCGCAAAGA AGATAGAGAG
CTTCAGCGGA CGGAGGATAA AGAGCTTCAG CGAAAAGGAG ATAGAGAGCT TCAGCGTGCG
GAGGATAAAG AGCTTCAGCG CAAAGAAAAT GAAGAGCTTC AGCGTAAGGA AGATAAAGAG
CTTCAACGAA AAGAAGATGA AAATCTTCAG CGTAAGGAAG ATAAAGAACT CCAGCGCAAA
GAAGAGGACA TACAACGCGC CTCTCAGCCC GACAAAGAAT TAGCGCGCAA ACCAGAGCAG
GAACAAGAAC CCAAAATAGC GCGCAAACCG CAGGTTGAAG AACAACAATT ACAGCGCAAA
GCACACGAGC AACAAGAAGA GATTCAGCGC AAGGCAGAGG GAAGCCCCGA TGCAGGAAGT
AACGTAACCG CCGAAATACG CAGCGCAATG GCTGGTGGTG ACCCATTGCC GCTTTCCGTA
AGGCGGTTTA TGGAACCCAG ATTTAATGCC GACTTTAGCA ATGTAAAAGT GCACAGCAAT
ACCCAGTCTG CCAATTTAAA TAAAAAGGTG AGCGCTAAAG CGTTTGCGGT TAAAAATCAT
ATTTTCTTTG GTAAAGATCA ATACCAACCC GAGTCCGACG AGGGCAAACA TTTACTCGCT
CACGAGCTAA CACATACTAT TCAACAGGGC GCCGCAAGCC AAGGGGATGG CGCTAATCAG
GGCGGCGGTG CAAACGTGCA ACGCACCGTC GAAGACGAAG TGCAGCGTAA AGTTGCGGTA
AATCAACGCA CCGCCCCCAA GGTGCAACGC CTAGGCGTGC GCGATGCGCT CGATTATTTT
GCCGATCATG CCAACCACAT TCCCGGCTTT CGCATGTTTA CTATTGTACT GGGTGTAAAC
CCGATTAATA TGCGCAGTGT AGATAGAACC CCAGCGAATA TTCTGCGTGC AGTGGTAGAG
TTTATGCCTG GCGGTGCTTT CATTACCCGC GCGTTAGATA ATCACGGCGT ATTCGAGCGA
GTGGGCAATT GGGTGTCGCA GCAATTGCGC AGTTTGGCCA TAACTGGCTC GCTTATTAGG
TCTTCAATTA ATCGGTTTTT AGATTCCCTA AGCTGGCGCG ATATATTTAA TTTAAGCGGC
GTTTGGCAGC GCGCAAAACG CATATTTACT GAGCCTATAG ATCGCATAAA AAGTTTTGTG
CGCGGTTTAG TCAATGGCAT TATTCAGTTT GTAAAAGATG CGATTCTTAT GCCCCTAGCG
CGGCTAGCAT CGCGCACCCG AGGTTGGGAT TTACTGTGCG CCGTACTACA GCGCAACCCC
ATTACCGGTG AACCCGTAGC GCGTAATGCC GAAAACTTAA TTGGCGGCTT TATGACGTTA
ATTGGCCAGC AAGAAGTGTG GCAAAACATA AAGCGGGCAA ATGCTATTGG GCGCGCGTGG
GTGTGGTTCC AAGGTGCGCT CGCGGGGTTG CTCGGTTTTG TTCGCTCTAT TCCTAGTTTA
TTTGTAAATG CATTTCGCGC CTTAGGTATT CGCGATTTAC TCGATGTGCC CGGCGCGTTT
ATGCGTGTGG CACGCGTATT TGGCAGCTTT ATAGGTCGCT TTTTTAGTTG GGCTGGCGGC
ACGGTAATGA ACTTGCTGCA AATTATTTTT GAGGTGGTTG CCCCTGGGGC TATGCCGTAT
TTGCGCCGCG CTGGTGGCGC ATTCCGCTCT ATTATCCGCA ACCCTATAGG TTTTATTCGC
AACCTTGTTA ATGCCGGCAA AATGGGCTTT AGGCGTTTTG CTACTAACTT TTTAACCCAC
TTGCGTACCT CTTTGGTTAA CTGGCTTACA GGCACGCTAG GCGGCACGGG TGTGTATATC
CCGCAGGCGT TTACCCCGCG TGAGCTAATA AAATTTGTAT TAAGTGTACT GGGCTTAACC
TGGCAAAACG TGCGTACCAA GCTTGTGCGG GCGGTTGGTG AGCGGGCGGT TACGGCCATG
GAAACAGGGT TTGAATTGGT GCGCACCCTT ATTACCGAAG GCCCCGCTGC TGCGTGGCAA
AAAATATCAG AGGGGCTTAC CAATCTGCGT GAAATGGTTA TAGAGCAAAT AATGAGTTTT
GTGCGCAGCA GAATTATTCA AGCCGCCGTA ACGCGTTTGC TTTCTATGTT GTCACCAGCG
GGAGCGTTTA TTCAGGCGAT TATTGGTATT TACAATACCG TTATGTTTTT TGTCGAGCGT
TTGCGCACCA TTATTCAAGT GGGTATGTCG TTTGTTAACT CTATAATGGC AATAGCCGCC
GGCAGAATTA CCGCCGCTGC CGTGCGAGTA GAGCGCACAA TGGCAGGCAT GCTTACCTTA
ATGATTAGCT TTCTTGCGCG CATTGCCGGA TTAGGGCGCG TGGCGACAGT GGTTACTCAA
CTTATTAACC GCGTGCGGGC ACCGGTGGAT AGAGCGTTAG ATAGAGTGGT TGCTTGGATA
GTGGCGCAAG CGCGCAGGTT AGGGCGATTT ATTCTGCAAG CGGGTGTGCC GCAAGACCCG
CAACAGCGTG CAGTGCAAGG TATGAACGCC GCCGTTGCCG TTGTAAACCG CTTGCCGGGT
AATCGAATTG GCGAAGCGGT TATCCACCCT GCACTGCGAG CAATAAAGGC GCGCTATGGG
TTTAGTTTAT TGCAGCCAGA ATTGCGAGGG GGGCGCTGGT GGGTTATAGG TGAAATGAGC
CCCAGACGCG CACAACAAAC ACAAAAAACA TCTACTTCTG CACCCGCTGC CGCTGCGGCC
TCAGCCCTGC CAGACCAAGT GGATATACTT AACGCCAGCA ATGCTATTTT AATTCGCAAT
TATTCGCGCT CTGCGCGCAC CGGTACATTT CAAGCGGCGA TATTTTCTAG TGCTGCAAAT
TTAAGTAAGT TACGCCACGC CCCTCAAGCG GGGCAAACAG GCCCACAAAC GGTACCGGCG
CCAGCGCCTA CAAATGTAGA TTACACAATA AGAGCAGCGA ATAGCCTATA CGGCCCGCCC
TCCGCCTTCC AAGCCGTGGA CCGCAGCGAC CCAGACGAAG CGGCCAGTTA TTCTCGTACG
CGAGAAGCGT TTCCAGAAGT GATGCGCGAA TGGTGGAAAA CTGAGCCGGC AGCCGATGCC
GCTAGAATTA CCCAGTTAAG AAGCCTAGGG CTAGTGGACA TAGACCCAAG TGGCGGCTTA
ATGCGCGGGG CAAGTAAGTG GAATTATATA TACTCGCAAT TAACCAATGC TGAAAAAAAC
AGATTGGCTG GGCCTGTTAA TAAAGACAAT ATGGGTGCGC TATTGGATAG CTTCCCAGCT
AGCAGACGTG ACACACTTCA AACCGCTTGG AAGCAGCGCT GGGCACAAGG CACACAAATT
CATCACATAA AACCGGTTAA TTTCGGCGGC GATAATTCTA ACTTTATTCC ATTAAGTGCA
GAAAAACACG TGGGCAGTAC CGGCGTTCAC CCGCGGTTTT GGACACCGCT TAAGCGCTTT
TTAATGGGGT TACGGGGGTA A
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| Protein sequence | MRSAATSAGA PLRLQAAGAK VSSPHDPEEK EADNTADKVM RMAVPDSQIA KVPTNTGGVF
RKLFRRPAKP NNEEKISRKA PNEEPQLKED KELQRKEDRE LQRTEDKELQ RKGDRELQRA
EDKELQRKEN EELQRKEDKE LQRKEDENLQ RKEDKELQRK EEDIQRASQP DKELARKPEQ
EQEPKIARKP QVEEQQLQRK AHEQQEEIQR KAEGSPDAGS NVTAEIRSAM AGGDPLPLSV
RRFMEPRFNA DFSNVKVHSN TQSANLNKKV SAKAFAVKNH IFFGKDQYQP ESDEGKHLLA
HELTHTIQQG AASQGDGANQ GGGANVQRTV EDEVQRKVAV NQRTAPKVQR LGVRDALDYF
ADHANHIPGF RMFTIVLGVN PINMRSVDRT PANILRAVVE FMPGGAFITR ALDNHGVFER
VGNWVSQQLR SLAITGSLIR SSINRFLDSL SWRDIFNLSG VWQRAKRIFT EPIDRIKSFV
RGLVNGIIQF VKDAILMPLA RLASRTRGWD LLCAVLQRNP ITGEPVARNA ENLIGGFMTL
IGQQEVWQNI KRANAIGRAW VWFQGALAGL LGFVRSIPSL FVNAFRALGI RDLLDVPGAF
MRVARVFGSF IGRFFSWAGG TVMNLLQIIF EVVAPGAMPY LRRAGGAFRS IIRNPIGFIR
NLVNAGKMGF RRFATNFLTH LRTSLVNWLT GTLGGTGVYI PQAFTPRELI KFVLSVLGLT
WQNVRTKLVR AVGERAVTAM ETGFELVRTL ITEGPAAAWQ KISEGLTNLR EMVIEQIMSF
VRSRIIQAAV TRLLSMLSPA GAFIQAIIGI YNTVMFFVER LRTIIQVGMS FVNSIMAIAA
GRITAAAVRV ERTMAGMLTL MISFLARIAG LGRVATVVTQ LINRVRAPVD RALDRVVAWI
VAQARRLGRF ILQAGVPQDP QQRAVQGMNA AVAVVNRLPG NRIGEAVIHP ALRAIKARYG
FSLLQPELRG GRWWVIGEMS PRRAQQTQKT STSAPAAAAA SALPDQVDIL NASNAILIRN
YSRSARTGTF QAAIFSSAAN LSKLRHAPQA GQTGPQTVPA PAPTNVDYTI RAANSLYGPP
SAFQAVDRSD PDEAASYSRT REAFPEVMRE WWKTEPAADA ARITQLRSLG LVDIDPSGGL
MRGASKWNYI YSQLTNAEKN RLAGPVNKDN MGALLDSFPA SRRDTLQTAW KQRWAQGTQI
HHIKPVNFGG DNSNFIPLSA EKHVGSTGVH PRFWTPLKRF LMGLRG
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