| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_1044 |
|---|
| Symbol | |
|---|
| ID | 3967798 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Saccharophagus degradans 2-40 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007912 |
|---|
| Strand | + |
|---|
| Start bp | 1332066 |
|---|
| End bp | 1332503 |
|---|
| Gene Length | 438 bp |
|---|
| Protein Length | 145 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 42% |
|---|
| IMG OID | 637920111 |
|---|
| Product | tail lysozyme, putative |
|---|
| Protein accession | YP_526518 |
|---|
| Protein GI | 90020691 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG3628] Phage baseplate assembly protein W |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 54 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCAGAAA ATTCCGACCT AAATAATAAA TCGTTTCTTG GCACTGGCTG GAGCTTTCCG
CCGAGCTTTT CGCAAGCCAA TGGCGAAGTA GAAATGACCA GTGACGAAGC CGATATAGAA
GCGAGTTTAA AAATATTACT GGGCACAACG GCGGGTGAGC GTTTAATGGT GCCCAAGTAC
GGGTTAAACC TTAAAGAGCA ATTATTTAGC TCTTTAAATA CTACAGCGCA AACAATACTG
CGCGACCGTA TCAAAACCGT ATTACTTGTA CATGAACCGC GTATAAACGT ATTAATGGTA
GCAATAGATA CAACAAGTTT GCTCGAGGGC CAGCTTATTA TAAATATCGA TTACGAAATA
CGCGCAACCA ATTCGCGTTT TAACTTGGTC TACCCATATT ATCTATTCGA TGGTAGCGAA
GTAAGGCCAA CCGCTTAA
|
|---|
| Protein sequence | MAENSDLNNK SFLGTGWSFP PSFSQANGEV EMTSDEADIE ASLKILLGTT AGERLMVPKY
GLNLKEQLFS SLNTTAQTIL RDRIKTVLLV HEPRINVLMV AIDTTSLLEG QLIINIDYEI
RATNSRFNLV YPYYLFDGSE VRPTA
|
|---|
| |