Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sde_1041 |
Symbol | |
ID | 3967795 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharophagus degradans 2-40 |
Kingdom | Bacteria |
Replicon accession | NC_007912 |
Strand | + |
Start bp | 1329314 |
End bp | 1329979 |
Gene Length | 666 bp |
Protein Length | 221 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 637920108 |
Product | hypothetical protein |
Protein accession | YP_526515 |
Protein GI | 90020688 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 56 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGAAAATG GCGAGCTAGA AAAGCTACTC ATAAAAGCTT ATACCCAAGC CGATTACTCA GGTGATGTGT TTGGCGAGTT TGAGGCGTAT GTTAACCCTA ACGAAATAAC ACTTGCTTAC GAAATGGAGT ACGACAGTAG TCAAGCATCA GGCACCACTA ACAGCCGCAT GGAGTTTAAA AAGGTAAAGC CAGGCGATAT GTCGTTGTCT TTTTTTATTG ATGGTACTGG CGCTAACGGA GTAAAAATAG ATGTGCAGCA ACGAGTAGAG GCCTTTCAAA CAATTACTGG CTATAACGGC GATATACATC GGCCAAATTA TTTGATTGTA GCGTGGGGTA CATTGCAGGT TAAACGTTGC ATCCTTAAGT CGGCATCAAT TGCCTATAAA TTGTTTAAGC CTAGCGGCGA ACCCTTGCGC GCTGTGATAT CGGCCACCTT TACCGATAAT TCCGACGATG AAACACGCGT TGCACTGGCG CAAGATGAAT CCCCAGACCT AACCCACGCC CGTATTTTTG CCGCAGGCGA TAACCTGCCA ATGATGTGTT ATCAAATATA CGGCAGCCCG CATTACTACT TAGATGTGGC AGAAGCGAAT GGTTTAGATA ACTTCCGGAA TATAGCGCCG GGTACCCGTA TTTTATTTCC ACCGCTGGAG AAATAA
|
Protein sequence | MENGELEKLL IKAYTQADYS GDVFGEFEAY VNPNEITLAY EMEYDSSQAS GTTNSRMEFK KVKPGDMSLS FFIDGTGANG VKIDVQQRVE AFQTITGYNG DIHRPNYLIV AWGTLQVKRC ILKSASIAYK LFKPSGEPLR AVISATFTDN SDDETRVALA QDESPDLTHA RIFAAGDNLP MMCYQIYGSP HYYLDVAEAN GLDNFRNIAP GTRILFPPLE K
|
| |