Gene Sde_1031 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSde_1031 
Symbol 
ID3967785 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharophagus degradans 2-40 
KingdomBacteria 
Replicon accessionNC_007912 
Strand
Start bp1319480 
End bp1320235 
Gene Length756 bp 
Protein Length251 aa 
Translation table11 
GC content43% 
IMG OID637920098 
Productputative metabolite transport protein CsbC 
Protein accessionYP_526505 
Protein GI90020678 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones46 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGCTACTTG CCTGCGCACA ACAAATTACC GGCATTAACG CCATTTATTT TTATGCACCC 
ACAATATTCG AACAAAGCGG TGTAGGCACC AACGCCGCCT TTGCCCAAGC GGCACTCATT
GGCTTAATAA ACGTATTATT TACCATTGTA GCCATGGGTT TAATTGATAA AGTTGGCCGC
AAGCCATTGC TATTAATAGG CCTTACTGGT GTAGCCATAA GTATGAGCTT ATGCGCATGG
GAATTTAAAC AAGCTCACTA TAAAATAGAA AACGCCGCCA TTTTTGAAGA GCTCAACATA
CCAGCCCCAA TGAACTTAGT TGGCGTAACA TTTAACAGCG ATACCGAATT TAAACAAGCG
CTCCGCATAG AGCTAGGAGA CCTAGCAGCA AAAGATTACG AAGCAAAACT TATTAGCAAT
GCGATTCAGT TTAATGCCAA ATTATTTTTG TTTGGTATTT TATTATTTGT AGCATCGTTT
GCCGTATCCC TTGGCCCAGT AATGTGGGTA TTACTTCCAG AAATATTCCC CAACCACCTG
CGCGGTGTAG GCATGGCACT TACCGGCTTA GTCAATAGCG CAGTAAGCTT TAGCGTACAG
CTTGTATTCC CGTGGGAGCT AAGTCAGCTG GGCGCCGCAC TTACATTTTT TATCTACGGC
GCCTTCGCAC TACTGGGCTG TATTTTAGTT GCTCGCTACT TGCCAGAAAC AAAAGGTAAA
TCGTTAGAGG AGCTAGAGGC AACATTTATT AAATAG
 
Protein sequence
MLLACAQQIT GINAIYFYAP TIFEQSGVGT NAAFAQAALI GLINVLFTIV AMGLIDKVGR 
KPLLLIGLTG VAISMSLCAW EFKQAHYKIE NAAIFEELNI PAPMNLVGVT FNSDTEFKQA
LRIELGDLAA KDYEAKLISN AIQFNAKLFL FGILLFVASF AVSLGPVMWV LLPEIFPNHL
RGVGMALTGL VNSAVSFSVQ LVFPWELSQL GAALTFFIYG AFALLGCILV ARYLPETKGK
SLEELEATFI K