Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sde_1031 |
Symbol | |
ID | 3967785 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharophagus degradans 2-40 |
Kingdom | Bacteria |
Replicon accession | NC_007912 |
Strand | - |
Start bp | 1319480 |
End bp | 1320235 |
Gene Length | 756 bp |
Protein Length | 251 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 637920098 |
Product | putative metabolite transport protein CsbC |
Protein accession | YP_526505 |
Protein GI | 90020678 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 46 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGCTACTTG CCTGCGCACA ACAAATTACC GGCATTAACG CCATTTATTT TTATGCACCC ACAATATTCG AACAAAGCGG TGTAGGCACC AACGCCGCCT TTGCCCAAGC GGCACTCATT GGCTTAATAA ACGTATTATT TACCATTGTA GCCATGGGTT TAATTGATAA AGTTGGCCGC AAGCCATTGC TATTAATAGG CCTTACTGGT GTAGCCATAA GTATGAGCTT ATGCGCATGG GAATTTAAAC AAGCTCACTA TAAAATAGAA AACGCCGCCA TTTTTGAAGA GCTCAACATA CCAGCCCCAA TGAACTTAGT TGGCGTAACA TTTAACAGCG ATACCGAATT TAAACAAGCG CTCCGCATAG AGCTAGGAGA CCTAGCAGCA AAAGATTACG AAGCAAAACT TATTAGCAAT GCGATTCAGT TTAATGCCAA ATTATTTTTG TTTGGTATTT TATTATTTGT AGCATCGTTT GCCGTATCCC TTGGCCCAGT AATGTGGGTA TTACTTCCAG AAATATTCCC CAACCACCTG CGCGGTGTAG GCATGGCACT TACCGGCTTA GTCAATAGCG CAGTAAGCTT TAGCGTACAG CTTGTATTCC CGTGGGAGCT AAGTCAGCTG GGCGCCGCAC TTACATTTTT TATCTACGGC GCCTTCGCAC TACTGGGCTG TATTTTAGTT GCTCGCTACT TGCCAGAAAC AAAAGGTAAA TCGTTAGAGG AGCTAGAGGC AACATTTATT AAATAG
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Protein sequence | MLLACAQQIT GINAIYFYAP TIFEQSGVGT NAAFAQAALI GLINVLFTIV AMGLIDKVGR KPLLLIGLTG VAISMSLCAW EFKQAHYKIE NAAIFEELNI PAPMNLVGVT FNSDTEFKQA LRIELGDLAA KDYEAKLISN AIQFNAKLFL FGILLFVASF AVSLGPVMWV LLPEIFPNHL RGVGMALTGL VNSAVSFSVQ LVFPWELSQL GAALTFFIYG AFALLGCILV ARYLPETKGK SLEELEATFI K
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