Gene Sde_1023 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSde_1023 
Symbol 
ID3967777 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharophagus degradans 2-40 
KingdomBacteria 
Replicon accessionNC_007912 
Strand
Start bp1306216 
End bp1307121 
Gene Length906 bp 
Protein Length301 aa 
Translation table11 
GC content50% 
IMG OID637920090 
Producthypothetical protein 
Protein accessionYP_526497 
Protein GI90020670 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones41 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCGTTT GGCGTAAGTT GCATCTGTTA TTGAGGGTGT CTGCTTGGCT GCTTGTGCTT 
GCTGCAAGCG GGGTGCAAGG CAGTGCGATC CAAGAAGTCG ATGTGATGCA AATTCGCTAT
TGGAACGGCA CTGCCGCGCG CGACCCCTAC GAATTGGCAC TTTTGCTATT GGCTCTAGAT
AAAACCGCCG CCGACTACCC TCCGTTTAAT ATTACGCGCT TAGAGGCCGA TTTAGGCTCC
GATAGGGCTC GTCACGAGTT GGCGCGTGGC GAACTAATAA ATATATATGC AGCGCCATAT
CGCGCTAGAG TGGGCGAGGT AGAAACTAAA ATTGTGCAGG TGCCCATTCC TTTGCTTAAG
GGGTTGCTGG GGTATCGCAA CCTTGTTATT CGAGAGAAAG ACCTAGCGCG GTTTGAGCAA
ATCTCCAATA AAGAGGAGCT TAAGCCAATA TTAATTGGTC AAGGGCGCAG CTGGCCCGAT
GTTGCAATTT ACCGTCACAA CGGGCTTCAG GTGATGGATG AAGGGCTGTT TTCTAACCTG
TTTGCAATGC TTTCGCTGGG GCGTTTTGAC TGCTTGCCAT TAGGCGTAGT GGAGGCAAAA
GCCACATTGG CAGCATTTGA TGGCGATAAG CTCGACTTAA CTATCGCGCC GGACTTAATG
CTTTACTACC CGTGGCCTGT ATTGTTTCAA ATAAGTGGTA AGCACTCACT GCTAGCAGAG
CGCGTAACCA AGGGGCTGGC GTTGGCGGCG AAAGATGGCT CATTCGATGC GTTATTTGAT
CATTATTACG GCGAGCTAGT GGAGCAGTTG CGCGAACAAG AGTCGAAAAT GATTGTATTG
GAAAACCCCA CTCTTAAAGA GCAAATGGGG CTTCAAGAGC CTCAGCTAAC CGCTCTAGGC
CTATAG
 
Protein sequence
MRVWRKLHLL LRVSAWLLVL AASGVQGSAI QEVDVMQIRY WNGTAARDPY ELALLLLALD 
KTAADYPPFN ITRLEADLGS DRARHELARG ELINIYAAPY RARVGEVETK IVQVPIPLLK
GLLGYRNLVI REKDLARFEQ ISNKEELKPI LIGQGRSWPD VAIYRHNGLQ VMDEGLFSNL
FAMLSLGRFD CLPLGVVEAK ATLAAFDGDK LDLTIAPDLM LYYPWPVLFQ ISGKHSLLAE
RVTKGLALAA KDGSFDALFD HYYGELVEQL REQESKMIVL ENPTLKEQMG LQEPQLTALG
L