| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_1022 |
|---|
| Symbol | |
|---|
| ID | 3967776 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Saccharophagus degradans 2-40 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007912 |
|---|
| Strand | - |
|---|
| Start bp | 1305736 |
|---|
| End bp | 1306068 |
|---|
| Gene Length | 333 bp |
|---|
| Protein Length | 110 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 637920089 |
|---|
| Product | RNA methyltransferase TrmH, group 3 |
|---|
| Protein accession | YP_526496 |
|---|
| Protein GI | 90020669 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 47 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 32 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCTTTTG ATACAGCACT AGTAAATAGG TTACGCACCC ATTTTGATGG TCGCGACGAT
ATTATAGAAA AACGCATGTT TGGTGGAATG GCCTTTATGC TGGGCGGGCA CATGTGCGTA
GGCGTACTTA ACGACGCCTT AGTTGCGCGC ATTGGCCCAG ACCAACATAA AGAGTCGCTC
GCCAGTATGT ACGCCTCGCC ATTTGATTAC ACAGGTAAAC CATTAAATGG GTTTGTATAT
GTTGCGCCCG AAGGCATAAG CACAGACAAT GACTTAGCCG ATTGGGTGAG CAAATGTGAA
GGATTTGTTT TTACGCTGCC GCCCAAGCAC TAA
|
|---|
| Protein sequence | MAFDTALVNR LRTHFDGRDD IIEKRMFGGM AFMLGGHMCV GVLNDALVAR IGPDQHKESL
ASMYASPFDY TGKPLNGFVY VAPEGISTDN DLADWVSKCE GFVFTLPPKH
|
|---|
| |