| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_1009 |
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| Symbol | rpmA |
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| ID | 3965134 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | + |
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| Start bp | 1290773 |
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| End bp | 1291030 |
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| Gene Length | 258 bp |
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| Protein Length | 85 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 637920076 |
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| Product | 50S ribosomal protein L27 |
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| Protein accession | YP_526483 |
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| Protein GI | 90020656 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0211] Ribosomal protein L27 |
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| TIGRFAM ID | [TIGR00062] ribosomal protein L27 |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.00000000000911893 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCTCACA AGAAGGCAGG TGGTAGTACT CGTAACGGTC GCGATTCCGA AAGTAAACGC
TTAGGTGTTA AGCGTTTCGG TGGCGAAACT GTGACCGCGG GTAGCATTAT TGTTCGTCAG
CGTGGCACAC GCGTTCACCC AGGTGAAAAT GTTGGTTTAG GCAAAGATCA CACTTTGTTT
GCCAAGGTTG AGGGTGCCGT TAAGTTTGAA GTTAAAGGAC CAAACAATCG TAAATATGTA
AGCATTGTTG CTGCATAA
|
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| Protein sequence | MAHKKAGGST RNGRDSESKR LGVKRFGGET VTAGSIIVRQ RGTRVHPGEN VGLGKDHTLF
AKVEGAVKFE VKGPNNRKYV SIVAA
|
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