| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_0986 |
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| Symbol | |
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| ID | 3966228 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | + |
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| Start bp | 1258888 |
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| End bp | 1261062 |
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| Gene Length | 2175 bp |
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| Protein Length | 724 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 637920053 |
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| Product | 4-alpha-glucanotransferase |
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| Protein accession | YP_526460 |
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| Protein GI | 90020633 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1640] 4-alpha-glucanotransferase |
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| TIGRFAM ID | [TIGR00217] 4-alpha-glucanotransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.0154961 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTGATT TGGATCGCTT GTTCTACTGG CACGGTATTG CTCCAGATTT TATAAATTAT
AAAGGGGAGC ATATTCAGGT TTCCCTAGAA AACCGCAAAA ATCTGCTCTC CACTATGGGT
GTGGACGTAA CCTCTGATGC GTTGGTTAGT CGCGCGGCGT ATGACCTTGA TGTCGCCCCT
TGGGAATCCT GGGTGCCCCC TTTGTCGATT ACACCTGCCG GCAGCGGCGC CGGTTTGGGT
ATAAATTGCC ACCCAGCTAT AGTCGATAAA GAGCTAAAGT GGGTATTAAC AGAAGAAGCG
AGTGGCGAGT TAGTTGCAGA AGGATTATTT AAGCCGATTA CAGGGGAGGA GGTCGGCGAT
TATATTTACG GTGATACACG TTATACAAGA CGGGTACTCC CTCTTCCCGA TTTACCTCCC
AATTATTACT CTTTACAGCT AGAGCTGAAA GATAGGATTG AATCGACTGT TGTTGCGATG
TTCCCCGTGC GGGGAATGAT GCCTGATTGG CTGCAAGATC AGGCCGGCTA TCACGGTATT
ATTATCCAGC TTTACACTTT GCGATCCGCT ACAAACTGGG GGGTTGGCGA CTTTAATGAT
TTAAAACAAT TAATACGATT TTGCGCCGAT CAGGGCGTTG ATACTATCGG TTTAAACCCC
CTCCACGCGC TCTTGCCAGA GATAGAAGCG CATTGCAGCC CATATAGCCC CTCTGACAGG
CGGCATATAA ACCCTCTTTA TATTTCGCTA CAGGATGTAC CAGAGTTCGC CAGTGTAATG
GCGGCTATGT CAGATGCCGA GAAAGCCAAG CTTCAGGCCA GCATCGAAGA ATTAAGAGAG
CGGCCATTGG TTGACTATGC AGCTGTGCGA GCACTGAAGT TGGATATGCT TGAGCGAATG
TTCATGACTT TTGATGCTGC TCGTGGCTCG GAGAACGCAT CTAGACGGCA AGAGTTTGAA
CAATTTGTGG CTCTTCATGG TGCGGTGCTA GAGCGCTTTG CGCTTTTTGA AGTCATGAAA
GCGGATGCCT GTACCTTTGA GCAAATAGTG GAAGTGATGG ATAGTGCGCC CAATAGCGCT
CTGTTAGGCG AAGCTTTACA GCAATATGCA ATCAAAATTC GCAGTATCTA CTACCAGCAG
TGGTTAGCTC ATGTTCAGTT TTCGGCGTGC CAAGCTTTGG CTGAACAGTT GCAAATGCCT
ATAGGGATAA TACGTGACTT AGCCGTTGGG GCAGACCGTG GCGGTGCTGA GGTGTTGAGC
AACCAACATT TGTTTTGTGC TAAAGCTGCG GCAGGAGCGC CACCAGACGC CTTCTCTGCC
ATTGGGCAGA ACTGGGGCTT GCCACCGATG GACCCCGCAG GCTTAAGGAA AAGTGGCTTT
GCGCACTTTC GCGAATTATT GCGCAGTAAT ATGGCTAGCT GTGGAGCGTT GCGTATAGAC
CATGCAATGG GGTTGATGCG CCTGTGGTGG TGCCCTCCGG GCAAAACCGC AGATTATGGC
GCTTACGTTT ACTACCCCTT TGAAGAGTTA ATAGCTTTGT TAAAGCTCGA AAGCCATTTA
AACAACTGTG TTGTTATTGG TGAAGACCTA GGGATTGTTC CTCATAACTT TAGAGAAACA
ATGTCTGCAG CTGGTGTGGT GTCGAATAAA GTCTTTTATT TTGAGCGCAC TGGGCCTACT
TCCTTTAAGC CGCCCAGTCA CTACGATTCG TTTGCCCTAG CAATGATAAA CAATCATGAC
GTGCCGACGC TCGCAAGCTG GTGGAACGGG CAGGATATTC TATTGAGGCG AGATTTAGAT
ACCCTAGGCG AAGGGGCGAA TCTCGATGCG CTGCTGGATG AGCGTCGACA AGAAAAAGAA
GATCTATTTG CTCAGCTCAA TCGAGATGGC TTTTTGCCAA ATAGTTGGCA CGATAAAAGC
GTGCATGAAA CAGCAGACCA AAATTTGGTC TTTTCTATTA TGAAGTGGAT GGCGCAAGTT
AACTCTAAGT TATATGTGAT TCAGCTGGAG GACTTAATGT TAATGACCGA TCCAGTAAAC
GTGCCTGGTA CATACCAAGA GTACCCAAAC TGGCAGCGCA AACTCAAATT GTCCGTTGAA
GATCTAGAAA AAAATACTGC CGTTACCGAT TTGTTAAAGA GCATTAGCAA TACACGAAAA
AATAAGGGAA ATTAA
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| Protein sequence | MSDLDRLFYW HGIAPDFINY KGEHIQVSLE NRKNLLSTMG VDVTSDALVS RAAYDLDVAP
WESWVPPLSI TPAGSGAGLG INCHPAIVDK ELKWVLTEEA SGELVAEGLF KPITGEEVGD
YIYGDTRYTR RVLPLPDLPP NYYSLQLELK DRIESTVVAM FPVRGMMPDW LQDQAGYHGI
IIQLYTLRSA TNWGVGDFND LKQLIRFCAD QGVDTIGLNP LHALLPEIEA HCSPYSPSDR
RHINPLYISL QDVPEFASVM AAMSDAEKAK LQASIEELRE RPLVDYAAVR ALKLDMLERM
FMTFDAARGS ENASRRQEFE QFVALHGAVL ERFALFEVMK ADACTFEQIV EVMDSAPNSA
LLGEALQQYA IKIRSIYYQQ WLAHVQFSAC QALAEQLQMP IGIIRDLAVG ADRGGAEVLS
NQHLFCAKAA AGAPPDAFSA IGQNWGLPPM DPAGLRKSGF AHFRELLRSN MASCGALRID
HAMGLMRLWW CPPGKTADYG AYVYYPFEEL IALLKLESHL NNCVVIGEDL GIVPHNFRET
MSAAGVVSNK VFYFERTGPT SFKPPSHYDS FALAMINNHD VPTLASWWNG QDILLRRDLD
TLGEGANLDA LLDERRQEKE DLFAQLNRDG FLPNSWHDKS VHETADQNLV FSIMKWMAQV
NSKLYVIQLE DLMLMTDPVN VPGTYQEYPN WQRKLKLSVE DLEKNTAVTD LLKSISNTRK
NKGN
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