| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_0985 |
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| Symbol | |
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| ID | 3966227 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | + |
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| Start bp | 1258184 |
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| End bp | 1258582 |
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| Gene Length | 399 bp |
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| Protein Length | 132 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 637920052 |
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| Product | 50S ribosomal protein L17P |
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| Protein accession | YP_526459 |
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| Protein GI | 90020632 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0203] Ribosomal protein L17 |
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| TIGRFAM ID | [TIGR00059] ribosomal protein L17 |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 0.200364 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.00397846 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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| |
Sequence |
| Gene sequence | ATGCGTCATC GTCATAGTGG ACGTCAATTA AATAGAAATA GCTCTCACCG TAAAGCTATG
TTTAAAAACA TGGTAACGTC GTTGGTTGAA CATGAATTAA TCAAAACGAC TTTGCCTAAA
GCAAAAGAGC TTCGCCGTTA CGCAGAGCCA CTTATCACTT TATCTAAAAG TGATTCAGTA
GCTAACCGTC GTTTAGCGTT TGCTCGTTTG GGTAATAAAG CTACCGTAGG TAAGCTCTTT
AACGAGTTAG GCCCACGTTA CGAAGGTCGC CCTGGCGGTT ACTTGCGTAT TATGAAGTGC
GGCTTCCGCG CCGGCGACAA AGCTCCAATG GCTTATGTTG AACTAGTGGA CCGTCCAGCT
CCTGTAGCTG CTGAGCCAGT AGAAAGCTCA GAAGATTAA
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| Protein sequence | MRHRHSGRQL NRNSSHRKAM FKNMVTSLVE HELIKTTLPK AKELRRYAEP LITLSKSDSV
ANRRLAFARL GNKATVGKLF NELGPRYEGR PGGYLRIMKC GFRAGDKAPM AYVELVDRPA
PVAAEPVESS ED
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