| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_0983 |
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| Symbol | |
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| ID | 3966225 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | + |
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| Start bp | 1256471 |
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| End bp | 1257091 |
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| Gene Length | 621 bp |
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| Protein Length | 206 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 637920050 |
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| Product | SSU ribosomal protein S4P |
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| Protein accession | YP_526457 |
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| Protein GI | 90020630 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0522] Ribosomal protein S4 and related proteins |
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| TIGRFAM ID | [TIGR01017] ribosomal protein S4, bacterial/organelle type |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.000000000923822 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.00443869 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGCTCGTT ATATTGGACC AACTTGTAAA TTATCTCGTC GTGAAGGCAC AGATCTGTTC
TTAAAGAGCG GTGTGCGTCC ACTAGAGTCT AAATGTAAAG CTGAAGCAGC TCCTGGCCAA
CATGGTCAAC GTCGCGGTCG TTTGTCTGAC TACGGTGTTC AGTTGCGTGA AAAGCAAAAA
GTTCGTCGTA TTTACGGTGT GTTAGAAAAG CAATTCCGTA ACTACTACAA AGACGCTGCT
CGTATCAAAG GCGCTACCGG TGAGAACTTG TTGAAGTTGC TCGAAGGTCG TTTGGATAAC
GTTGTTTACC GTATGGGCTT CGGCTCTACC CGTGCAGAAT CAAGACAGCT TGTTTCACAC
AAAGCAATCT TGGTTAACGG TAAAACTGTA AACATCCCTT CATTCCAAGT GAACGTAGGT
GACGTGATCT CTGTTCGTGA GAAGTCTAAG AACCAATTGC GAATTCAAAA CTCGTTAGGT
ATAGCTGGTC AACGCGCTGA TGTAGAGTGG GTTGATGTTA ATACTGAGAA GAAGGAAGGC
GTGTTTAAGC GTTGTCCAGA TCGTGCTGAT TTACCAGCCG AGATCAACGA GAACCTCATC
GTCGAGCTTT ACTCTAAGTA A
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| Protein sequence | MARYIGPTCK LSRREGTDLF LKSGVRPLES KCKAEAAPGQ HGQRRGRLSD YGVQLREKQK
VRRIYGVLEK QFRNYYKDAA RIKGATGENL LKLLEGRLDN VVYRMGFGST RAESRQLVSH
KAILVNGKTV NIPSFQVNVG DVISVREKSK NQLRIQNSLG IAGQRADVEW VDVNTEKKEG
VFKRCPDRAD LPAEINENLI VELYSK
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