Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sde_0980 |
Symbol | rpmJ |
ID | 3966222 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharophagus degradans 2-40 |
Kingdom | Bacteria |
Replicon accession | NC_007912 |
Strand | + |
Start bp | 1255297 |
End bp | 1255413 |
Gene Length | 117 bp |
Protein Length | 38 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 637920047 |
Product | 50S ribosomal protein L36 |
Protein accession | YP_526454 |
Protein GI | 90020627 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0257] Ribosomal protein L36 |
TIGRFAM ID | [TIGR01022] ribosomal protein L36, bacterial type |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.0000000194486 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.00368678 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAAAGTTC GTGCTTCAAT TAAAAAAATG TGTCGCAATT GCAAATTAGT TCGTCGTAAG GGCGTATTAA GAGTTATTTG CTCCGCAGAG CCACGTCATA AGCAGCGTCA AGGCTAA
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Protein sequence | MKVRASIKKM CRNCKLVRRK GVLRVICSAE PRHKQRQG
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