| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_0972 |
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| Symbol | rpsN |
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| ID | 3967687 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | + |
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| Start bp | 1250998 |
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| End bp | 1251303 |
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| Gene Length | 306 bp |
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| Protein Length | 101 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 637920039 |
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| Product | 30S ribosomal protein S14 |
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| Protein accession | YP_526446 |
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| Protein GI | 90020619 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0199] Ribosomal protein S14 |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.00000000120415 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 2 |
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| Fosmid unclonability p-value | 0.000000929871 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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| |
Sequence |
| Gene sequence | ATGGCTAAGA AGTCAATGAT AGCTCGCGAA ACAAAGCGTG CAAAAACAGT TGAAAAGTAC
GCTGCAAAGC GCGCTGAACT AAAAGCAATC ATCAATAATC ACGAGTCTTC CGACGATCAG
ATCTGGGAAG CACAATTGAA GTTGCAAAAG TTACCTCGCG ATGCGAGTCC CAGTCGTCAG
CAACGTCGCT GTCGTATTAC AGGTCGTCCG CACGCCGTTT ATCGCAAGTT CGGCTTATGC
CGTAACAAAT TGCGTGAAGC TGCCATGCGT GGTGATGTGC CAGGTCTAGT TAAGGCTAGC
TGGTAG
|
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| Protein sequence | MAKKSMIARE TKRAKTVEKY AAKRAELKAI INNHESSDDQ IWEAQLKLQK LPRDASPSRQ
QRRCRITGRP HAVYRKFGLC RNKLREAAMR GDVPGLVKAS W
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