| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_0970 |
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| Symbol | rplX |
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| ID | 3967685 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | + |
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| Start bp | 1250096 |
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| End bp | 1250413 |
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| Gene Length | 318 bp |
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| Protein Length | 105 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 637920037 |
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| Product | 50S ribosomal protein L24 |
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| Protein accession | YP_526444 |
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| Protein GI | 90020617 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0198] Ribosomal protein L24 |
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| TIGRFAM ID | [TIGR01079] ribosomal protein L24, bacterial/organelle |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.0000143141 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 2 |
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| Fosmid unclonability p-value | 0.000000947265 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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| |
Sequence |
| Gene sequence | ATGCGTAAAA TTAAACGTAA TGACGAAGTG ATAGTTATCA CGGGTAAAGA CAAAGGGAAA
CGCGGTAAAG TTAATCGTGT ATTGTCTGAT GATCGCTTGA TTGTTTCTGG TGTTCAAATC
ATCAAGAAGC ACCAAAAACC AAATCCGCAA ATGGGTATAG CGGGTGGAAT CATCGAAAAA
GAAGCGCCAA TACAAGCTTC AAACGTAGCC ATTTTTAACC CAGCCACCAA CAAAGCAGAT
CGCGTTGGTT TCAAGCTGCA GGAAGACGGC AACAAGATTA GAGTTTTCAA GTCCAATGGC
GAAGCTATTG ACGCATAA
|
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| Protein sequence | MRKIKRNDEV IVITGKDKGK RGKVNRVLSD DRLIVSGVQI IKKHQKPNPQ MGIAGGIIEK
EAPIQASNVA IFNPATNKAD RVGFKLQEDG NKIRVFKSNG EAIDA
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