| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_0965 |
|---|
| Symbol | rplV |
|---|
| ID | 3967680 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Saccharophagus degradans 2-40 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007912 |
|---|
| Strand | + |
|---|
| Start bp | 1247711 |
|---|
| End bp | 1248043 |
|---|
| Gene Length | 333 bp |
|---|
| Protein Length | 110 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 637920032 |
|---|
| Product | 50S ribosomal protein L22 |
|---|
| Protein accession | YP_526439 |
|---|
| Protein GI | 90020612 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0091] Ribosomal protein L22 |
|---|
| TIGRFAM ID | [TIGR01044] ribosomal protein L22, bacterial type |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.00314246 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 2 |
|---|
| Fosmid unclonability p-value | 0.00000114714 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGGAAGTAG CAGCTAAATT ACGCGGCGCT GGCATGTCAG CGCAGAAAGC GCGCTTGGTT
GCAGACCAAA TTCGTGGTAA ATCGGTAGAA GAAGCCTTAG ATTTGCTGAC TTTCAGCACT
AAAAAAGGTG CCGCCCTTAT CAAGAAGGTC TTGGAGTCAG CCGTAGCAAA CGCAGAGCAC
AACGAAGGTG CAGATGTGGA TGAGCTGAAA GTGTCTACGA TTTTCGTAGA TGAAGGTTTA
ACCATGAAAC GTATCAGGCC GCGTGCAAAA GGTCGTGCAG ACCGAATTTT GAAACGCACT
TGTCACATTA CCGTTAAAGT AGCGGATCAA TAA
|
|---|
| Protein sequence | MEVAAKLRGA GMSAQKARLV ADQIRGKSVE EALDLLTFST KKGAALIKKV LESAVANAEH
NEGADVDELK VSTIFVDEGL TMKRIRPRAK GRADRILKRT CHITVKVADQ
|
|---|
| |