Gene Sde_0962 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSde_0962 
SymbolrplW 
ID3967677 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharophagus degradans 2-40 
KingdomBacteria 
Replicon accessionNC_007912 
Strand
Start bp1246238 
End bp1246534 
Gene Length297 bp 
Protein Length98 aa 
Translation table11 
GC content39% 
IMG OID637920029 
Product50S ribosomal protein L23 
Protein accessionYP_526436 
Protein GI90020609 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0089] Ribosomal protein L23 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.0000402083 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00000137402 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAACTTAG AGCGCCTATA TAAAGTTCTT CTTGGTCCTG TTATTTCTGA AAAGTCAGCT 
GTAGTTGCTG ATAAAGGTAA TCAGGTTGTT TTTAAAGTAG TTAAAACAGC CACTAAGCCA
GAAATTAAAG CAGCCGTAGA AAAACTGTTT AATGTAAATG TTCGAGACGT TCGCGTATTA
AATGTTAAAG GCAAAACTAA GCGTACTCGC TTTGGTTTGG GCCAGCGCAG CGACTGGAAA
AAAGCCTACG TACGACTAGA GCAAGGTCAA GAAATTGATT TTGCCATAGC GGAATAA
 
Protein sequence
MNLERLYKVL LGPVISEKSA VVADKGNQVV FKVVKTATKP EIKAAVEKLF NVNVRDVRVL 
NVKGKTKRTR FGLGQRSDWK KAYVRLEQGQ EIDFAIAE