| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_0955 |
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| Symbol | |
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| ID | 3967670 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | + |
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| Start bp | 1239717 |
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| End bp | 1241243 |
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| Gene Length | 1527 bp |
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| Protein Length | 508 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 637920022 |
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| Product | glycogen debranching protein GlgX |
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| Protein accession | YP_526429 |
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| Protein GI | 90020602 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2721] Altronate dehydratase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.00705486 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 1 |
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| Fosmid unclonability p-value | 0.000000244214 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | GTGGCCAAGT TAATACATTT GCACGAATTA GATAACGTAG CGATTACATT AGAGGCGTTG
GAGCCTCAGC AAGAGGTGCT GGTAGGTGGT GTGTCCATAG TGGCTGCTAC GGCTATAGAT
GCTATGCACA AAGTAGCTAC CGCGGCCATC CCCAAGGGTG AGCGCATATT AAAGTACGGT
CAGTTTATTG GTTATGCGGC TGAAGATATT CAGCCGGGTG AGCATGTTCA TACGCACAAT
TGTGTGGTGG GCGACTTTGA AAAAGATTAC GGCTTTTGTC GCAACGTAAC TCCTACCGCT
TTTGTAAGCG AAGAAAATCG CGCAACTTTT AATGGTTTTC GTAGAGTTAA CGGCAAGGTG
GGTACGCGCA ACTATATAGG TATTCTCACT ACGGTTAATT GCTCGGCAAC CGTTGCAAAA
CAGATTGCTG CTACGTTTAG TTACCCTGGT GCATTGGCGG ATTTCCCCAA TGTGGATGGC
GTTGTTGCGC TTACTCACGA GTCTGGTTGC GGTATGCGCT CAGAAGGTGA GGGGTATGAT
GTATTGCGTC GTACTTTCGA AGGGTATGTT ACTCACCCAA ATTTTGGGGG TGTTTTGCTG
GTTGGTTTGG GTTGCGAAAC GATGCAGGTG CAAAAAGTAT TGGACGACTC TGGTTTGTCT
GAGTCTGAAA GCTTTAGTAC TTATACCATT CAAAAGGTAG GTGGTACGCG TTTGGCTATT
GAGGAAGGGG TAGAGCGTGT TCGCAAGCTG CTGCCTATTG TTAATAGCTA TAATCGCGAA
CCATGCTCGG CGGCTGAGTT GGTTTTGGCG GTGCAGTGCG GCGGTTCTGA TGCTATGTCG
GGCGTAACGG CTAACCCTGC TTTGGGCGCT GCGGCAGATA TTCTTGTTCG CCACGGCGGA
ACGGTTATTT ATTCTGAAAC CCCAGAAATT TTCGGTGCAG AGCATTTACT TACCCGTAGA
GCGGAAACGC CTGAGTTGGC CGAAGGCCTA TTAGAGCGTA TTCGCTGGTG GGAAGACTAC
ACCCAGAAGC ATGGTTTTGA GTTAAATAAC AATCCATCCC CAGGCAACAA GGCGGGCGGT
TTGACGACTA TTCTAGAAAA ATCCCTCGGT GCGCAGGCGA AGGCCGGTAC GACTAATATG
CGTGGCGTTT ACCTCTATGC CGAAAAGGTC GATACAAACG GGTTGGTCTT TATGGATAGT
CCCGGTTTTG ACCCTGTGTC TGTAACCGGG CAGGTTGCAT CCGGCGCGAA TGTGGTGTGC
TTTACCACCG GTCGCGGTTC TGCCTTTGGC TTTAAACCTG TTCCAAGTGT GAAGTTGGCA
AGTAACACTG CTATATATAA GCATATGGAA GAGGATATCG ATATTAACTG TGGTGCTATT
ACCGATGGTG AGCACACCGT TCATAGCTTG GGCGAAGAAA TCTTCAAAAC CATCCTTGCT
ATTGCGTCCG GCGAACCAAG TAAAAGTGAG TCTCTTGGTT ACGGTGACGC TGAATTCAAC
CCATGGAAGA TTGGTGCTGT GGTGTAA
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| Protein sequence | MAKLIHLHEL DNVAITLEAL EPQQEVLVGG VSIVAATAID AMHKVATAAI PKGERILKYG
QFIGYAAEDI QPGEHVHTHN CVVGDFEKDY GFCRNVTPTA FVSEENRATF NGFRRVNGKV
GTRNYIGILT TVNCSATVAK QIAATFSYPG ALADFPNVDG VVALTHESGC GMRSEGEGYD
VLRRTFEGYV THPNFGGVLL VGLGCETMQV QKVLDDSGLS ESESFSTYTI QKVGGTRLAI
EEGVERVRKL LPIVNSYNRE PCSAAELVLA VQCGGSDAMS GVTANPALGA AADILVRHGG
TVIYSETPEI FGAEHLLTRR AETPELAEGL LERIRWWEDY TQKHGFELNN NPSPGNKAGG
LTTILEKSLG AQAKAGTTNM RGVYLYAEKV DTNGLVFMDS PGFDPVSVTG QVASGANVVC
FTTGRGSAFG FKPVPSVKLA SNTAIYKHME EDIDINCGAI TDGEHTVHSL GEEIFKTILA
IASGEPSKSE SLGYGDAEFN PWKIGAVV
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