| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_0948 |
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| Symbol | |
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| ID | 3965343 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | - |
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| Start bp | 1228337 |
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| End bp | 1229758 |
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| Gene Length | 1422 bp |
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| Protein Length | 473 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 637920015 |
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| Product | hypothetical protein |
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| Protein accession | YP_526422 |
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| Protein GI | 90020595 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.289629 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 3 |
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| Fosmid unclonability p-value | 0.0000199751 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCTGCGTT TGTTTGTATA TTGTCTTTTA TTGGCTGTCG CGTGCGGCAC AAGTTCCACC
TATGCCGGCG CGGTTTTGGC TTTCCCTGAA GCCGATGGTT ACGGTAAGTA CACCGTTGGT
GGGCGCGGAG GCCAAGTGTA TGTAGTTACG TCGCTAGAAG ACAATGTAAA CAAACCGCAG
CCGGGTACTC TGCGCTATGC CGTAGAGCAA GAAGGCCCGC GTATTATTAC TTTCGCAGTT
TCTGGCGTAA TCCACCTACA AGATAAACTC GTAGTGCGTA ATGATTTTAT AACCATCGCA
GGGCAAACAT CGCCAAAAGG TATTGCCTTG CGAGGCGAAC CTTTTATTGT GCAAGCCTCA
CAAGTTATTG TGCGTTATAT GCGCTTTAGA TTAGGCGCTA CCGAAAAAAA CGAAGATGCA
GCCACCGGTA AAAAAGAGCG CGATATTATT TTTGATCACT GTTCGTTTAG TTGGTCCATC
GACGAAGTAG CAAGCTTTTA CAACAACATT AATTTTACCC TGCAATACTC CATTATTGCG
CAAAGCCTTA ACCAAGCGAG CCATGTAAAG GGCAACCACG GTTATGGTGG CATTTGGGGC
GGCGCTGGGG CTTCGTTTCA CCACAATGTT ATTGCACATA ATACTAGCCG CAACCCACGT
ATTGCAGGCC ACCGGCTTAA AGCACCCTAT GCGCGCCACT TTGAACTTAC CGACATAATT
AATAACGTGG TATACAACTG GGGCGATAAC AGCGCCTACG GCAGTGAAGA TGGGCGTTTT
AATTTTATTG CCAATTATTA CATTGCAGGC CCAGCAACAA GTGCTAAACG CATTTTTCAA
TTTTATAAAA ACAGTAACGA TGAACAGTTT GGCCAAGGTT ACTTTACCGC CAACCAACTC
ATTGACAGTA ATGGTAAAAA CATCGCACCA CGAACCGAAA TAAAGGGCTA CAAGAAAGCG
CCTAAAAACC TTACTGACGC AATTTATTTG GCTGCGCCCG TTGGTGCAGA TCAAGCACAC
TTCTTTGCAG CAAACAGCGC TTACGCAAAC ATTCACACAG CCGAAGACAG CTACAAACTA
TTAATAGAAA AACGAGAAGT AGGCGCCAAC CGAGCCGCCA GCCAACCAAA CGCTAGCGCG
CTGGACAGCG TAGATACAGG CATACTAAAC GACATAGAAA ACCGCACCGC CAAATTTGGC
AATAAAGGCA TAATTAATAA CGAGCTTGAA ATTATTGAAA GCTGGGATGC CTACAGTGCA
GAATTCGCTG CGGCGCAAGC GAATACTCTC GCGGATAAAG ACTTAGACGG TATGCCTGAC
GCATGGGAAA ACGCACAAAA AATATCAAAC CCAGTCGGGC ACGAGTTAGA CCCTAACTAC
ACAAACATCG AAGTGTACTT AAACAGCCTT GGGCAATTTT AA
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| Protein sequence | MLRLFVYCLL LAVACGTSST YAGAVLAFPE ADGYGKYTVG GRGGQVYVVT SLEDNVNKPQ
PGTLRYAVEQ EGPRIITFAV SGVIHLQDKL VVRNDFITIA GQTSPKGIAL RGEPFIVQAS
QVIVRYMRFR LGATEKNEDA ATGKKERDII FDHCSFSWSI DEVASFYNNI NFTLQYSIIA
QSLNQASHVK GNHGYGGIWG GAGASFHHNV IAHNTSRNPR IAGHRLKAPY ARHFELTDII
NNVVYNWGDN SAYGSEDGRF NFIANYYIAG PATSAKRIFQ FYKNSNDEQF GQGYFTANQL
IDSNGKNIAP RTEIKGYKKA PKNLTDAIYL AAPVGADQAH FFAANSAYAN IHTAEDSYKL
LIEKREVGAN RAASQPNASA LDSVDTGILN DIENRTAKFG NKGIINNELE IIESWDAYSA
EFAAAQANTL ADKDLDGMPD AWENAQKISN PVGHELDPNY TNIEVYLNSL GQF
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