Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sde_0941 |
Symbol | |
ID | 3965336 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharophagus degradans 2-40 |
Kingdom | Bacteria |
Replicon accession | NC_007912 |
Strand | + |
Start bp | 1215435 |
End bp | 1216913 |
Gene Length | 1479 bp |
Protein Length | 492 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 637920008 |
Product | putative D-mannonate oxidoreductase protein |
Protein accession | YP_526415 |
Protein GI | 90020588 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0246] Mannitol-1-phosphate/altronate dehydrogenases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.0000798922 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.00848931 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAAAAGAA TCAATAATGA CTTGCTGGCA AGTGTAGATA GCTCTGCAAT TCAATTGCCG CAATACGATC GCGCAGGGGT AAAGCCTGGC ATTGTTCATT TGGGTATCGG GGCTTTCCAC AGAGCTCATC AGGCGTTTTA CACCGAAGCT GTGTTAAACC AGTTTGGTGG CGACTGGGGC ATTATTGGCT GCAGTCTTCG CTCTGCATCG GTAAAAACCC AGCTGGCAGA GCAGGATGGC TTGTACACCC TGGTAGAGCG TGGCCCAGAA GGTGAAAAGT TTCAAATAAT GGGTGCAGTA CAGCAGGTGG TTGTAGGGCC AGAAGACCCA GCAGCGTTAG TGGCTATTAT GGCTAACCCG CAAACTCAAA TTGTGTCGTT AACCGTTACT GAAAAAGGCT ATTGTCACGA CCCTGCTACC GGTAATTTAA ACCTTAGCCA CCCCGATATT CAGCACGACC TAGGCAACCT TAATGCGCCT AAATCGGCCA TCGGCTACAT TGTTGCTGCA TTGCTTGCAC GTAAAGAATC GGGCCAGTCC AGCTTTACCG TATTAAGTTG CGACAATTTA CCAAACAATG GTGAGGTGTT AGAAAAAGTT GTTTTACAGT TCGCCAAGCA GGTTAGTGCG GAGCTTTGCG AGTGGGTGAG TGCTCACACT AAGTTCCCTT CTACTATGAT CGACCGCATA GTGCCGGCCA CTACAGATAG TGATCGCGCA GACCTCGAGG CGAAAGTGGG CTACCGCGAT GAAGGCATGG TGGTGGCAGA GCCGTTTACC CAGTGGGTAA TTGAAGATAA ATTCTGCTCG GCGCGCCCGC AGTGGGAGCA AGTGGGTGCA TTGCTGGTAG AAGATGTTAC AGCGTTCGAA AAAATGAAGT TGCGTTTGCT AAACGGCAGC CACTCTATGT TGGCTTATGC CGGCTATTTG GCGGGCTTTG AAACCATTAG CGATGTAATG ACAGAGCCTG CTTTTGTCGC GCTATGTAAA AAGTTTATGG ATACCGAAGC TGGTCCTACA GTAAAAACGC CAGACGGTTT TGATATTGAA GATTACAAAA AGCAACTGCG CGACCGCTTT GCCAACCCTG GTTTGAAGCA TCGCACTTGG CAGATTGCGA TGGATGGCTC GCAGAAGATT CCTCAGCGCC TATTGGAAAC CTTGCGTGAG CAGTTGGCCA GTGGCGGTAG CATAGAGGTG ATAAGCCTAG CGATTGCCGC GTGGTTTAAA TACGTTTCGG CTGTAGATGA TGCCGGCAAT GCCATAGATG TGCAGGACCC GCTGGCAGCG CGTTTAAAAT CGCTGTGTGA CAGTCACCCC AATACCTCCG AGCGAGTAGC AGCATTGCTG GGCGTAAAAG AAGTGTTTGG TGAAGACTTG GTAGGCTGCT CGGCTTTTGC TGCCGCTATT AGCGCATGGT TAGATGCATT TGCTAAACAG GGTGTGCTGG CAACCATCAA GCAATCCTTC TCTGCATAG
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Protein sequence | MKRINNDLLA SVDSSAIQLP QYDRAGVKPG IVHLGIGAFH RAHQAFYTEA VLNQFGGDWG IIGCSLRSAS VKTQLAEQDG LYTLVERGPE GEKFQIMGAV QQVVVGPEDP AALVAIMANP QTQIVSLTVT EKGYCHDPAT GNLNLSHPDI QHDLGNLNAP KSAIGYIVAA LLARKESGQS SFTVLSCDNL PNNGEVLEKV VLQFAKQVSA ELCEWVSAHT KFPSTMIDRI VPATTDSDRA DLEAKVGYRD EGMVVAEPFT QWVIEDKFCS ARPQWEQVGA LLVEDVTAFE KMKLRLLNGS HSMLAYAGYL AGFETISDVM TEPAFVALCK KFMDTEAGPT VKTPDGFDIE DYKKQLRDRF ANPGLKHRTW QIAMDGSQKI PQRLLETLRE QLASGGSIEV ISLAIAAWFK YVSAVDDAGN AIDVQDPLAA RLKSLCDSHP NTSERVAALL GVKEVFGEDL VGCSAFAAAI SAWLDAFAKQ GVLATIKQSF SA
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