Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sde_0936 |
Symbol | |
ID | 3965331 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharophagus degradans 2-40 |
Kingdom | Bacteria |
Replicon accession | NC_007912 |
Strand | + |
Start bp | 1209468 |
End bp | 1209851 |
Gene Length | 384 bp |
Protein Length | 127 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 637920003 |
Product | ribosomal protein L14 |
Protein accession | YP_526410 |
Protein GI | 90020583 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 40 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.00542424 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | ATGAAAATAG AACATTTTGC TTACAACGTA TCAGACCCAG TAGCGATTGC TGATTGGTAC TGTAAATATT TGGGTTTTAG TGTAGCGAGA AAAATGGATG GTGCCCCATA CACTCATTTT CTAAAAGATT CTAGCGGCGC GGTGATGATA GAAATTTACT GCAACCCACC CAGTGAAGTA CCCGATTACC CATCGATGAA CCCCTTGCAG TTGCATTTAG CATTTGTGTC GGAAAACCCC AACGAAGATG CCGAGAGGTT AGTGGCTGCC GGTGCAAAGG TGGTGGATGA TTTGCATTTA AAGGACGGTT CACACTTAAT GATGTTAAAA GACCCTTGGG GCTTTGCTGT TCAATTGTGT AAGCGCGGTA CCCCAATGTT ATAG
|
Protein sequence | MKIEHFAYNV SDPVAIADWY CKYLGFSVAR KMDGAPYTHF LKDSSGAVMI EIYCNPPSEV PDYPSMNPLQ LHLAFVSENP NEDAERLVAA GAKVVDDLHL KDGSHLMMLK DPWGFAVQLC KRGTPML
|
| |