| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_0928 |
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| Symbol | |
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| ID | 3965569 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | + |
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| Start bp | 1197399 |
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| End bp | 1199504 |
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| Gene Length | 2106 bp |
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| Protein Length | 701 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 637919995 |
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| Product | elongation factor G |
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| Protein accession | YP_526402 |
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| Protein GI | 90020575 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0480] Translation elongation factors (GTPases) |
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| TIGRFAM ID | [TIGR00231] small GTP-binding protein domain
[TIGR00484] translation elongation factor EF-G |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.082436 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.00424173 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | GTGGCTCGTA AAACACCCAT CGTACGCTAT CGAAATATCG GTATCTGTGC GCATGTCGAT
GCAGGAAAAA CCACCACCAC CGAACGAGTG CTTTTTTACA CTGGTCTGTC ACATAAGATT
GGTGAAGTAC ACGATGGCGC AGCCACGATG GACTGGATGG AGCAAGAGCA GGAAAGGGGG
ATAACGATTA CCTCCGCCGC TACGACATGT TTTTGGTCGG GTATGCAGCA GCAGTTTCCT
CAACACCGTA TCAATATAAT TGATACCCCT GGGCACGTGG ACTTTACCAT CGAGGTAGAG
CGTTCTCTTA GGGTTTTGGA TGGGGCCGTA GTTGTATTGT GTGGCTCATC GGGTGTTCAG
CCGCAAACAG AAACTGTTTG GCGACAAGCG AATAAATACG AAGTGCCGCG ATTGGTTTTC
GTAAATAAAA TGGACCGCGC GGGAGCAAAC TTTCGCAGCG TGGTGCAGCA GTTGCGCGAC
CGTTTGGGGG CCAACGCAGT ACCGTTGCAT ATGACGATTG GCGCTGAAGA TGGTTTTGAA
GGCGTTATCG ATCTAATTAA GATGAAGTCT ATCCACTGGA ACGAAGCCGA TATGGGCATG
ACGTTCGAGT ATGGAGAGGT GCCAGAAGAT CTGCTGGAAG AATGCGAAGA GATGCGTGAA
TACGCAGTCG AAGCCGCGGC AGAGGCAAAT GATGATCTCA TGGAGAAGTA CCTAGAGACT
GGTGAGTTAA GCGAAGATGA GATTAAGGCG GGCCTGCGTG CGCGCACTCT AGCTAATGAG
ATCGTTCCAG TTTTAGGTGG TTCTGCATTT AAAAATAAAG GTGTACAGGC AGTGCTCGAC
GCTGTTGTGG AATACTTGCC TGCGCCCACA GAAGTAAAAG CGATTGAGGG TACTTTAATT
GATGGTGAGA CCGTCGATAC CCGAGTTGCT GACGACGATG CGCCGTTTGC AGCGCTAGCA
TTTAAAATTG CTACTGATCC ATTCGTTGGT ACGCTTACGT TCTTCCGTGT GTATTCTGGG
CGACTGGAGA GTGGTACAGC GGTATACAAC TCGGTTAAGC AAAAGCGCGA GCGCGTAGGC
CGTATGGTGC AGATGCACTC TAACAATCGC GAAGAAATTA AAGAAGTGCT GGCTGGCGAT
ATAGCTGCAG CCATCGGCTT AAAAGATGTA ACCACAGGGG ATACCCTGTG TGCAGAAAGT
AATAAAATTG TACTCGAGCG TATGGAGTTT CCAGAGCCGG TAATCTCTGT TGCTGTTGAG
CCGCGCACGG TTCCAGATCA AGAGAAAATG GCGGTCGCGC TGGCTAAGTT AGCGCAAGAA
GATCCGTCTT TTCGCGTTGC TACCGACGAA GAGACTGGGC AGACCATTAT CTCCGGTATG
GGCGAGTTGC ACTTAGATAT TATTGTAGAT CGCATGCGCC GTGAGTTTGG TGTTGACGCT
AATATAGGTA AGCCGCAAGT GGCCTACCGC GAGCGTATTA CGCGCACGTG TGAGGTTGAA
GGTAAGTTCG TTCGCCAATC TGGCGGGCGC GGTCAGTATG GTCACGTATG GATTCGTTTT
GAGCCTGCTG ACGATAACAA CGCCGAAGGC CTAGTTTTTG AAAACGAGGT TGTCGGGGGT
GCTGTACCAA AAGAGTATAT TCCGGCGGTG GAAAAAGGTA TTTCCGAGCA AATGCGCAAT
GGCGTATTGG CGGGTTACCC ATTGCTGGGC TTAAAAGCCA CTATATACGA CGGCTCCTTT
CATGATGTTG ACTCTAACGA GATGGCATTT AAAATTGCCG CGTCTATTGC AACAAAAAAT
TTAGCTGCAG AAGGCGGCGC GGTTTTATTA GAGCCGGTAA TGAAAGTGGA AGTGGTTACT
CCTGAAGAAA ATATGGGTGA CGTTGTGGGA GACCTCAATC GTCGTCGCGG TTTGATTCAG
GGTATGGAAG AGTGTATATC CGGCAAAGTA GTTCGGGCAG AGGTTCCTCT GGCTGAGATG
TTCGGTTATG CAACGGACCT GCGTTCCGCG ACGCAAGGTA GGGCAACTTT TACCATGGAG
TTCCAGCAAT ACTCGGAAGC TCCTAAAAAT GTTGCCGATG AGATTATGGC TAGAAACGGG
CGTTAG
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| Protein sequence | MARKTPIVRY RNIGICAHVD AGKTTTTERV LFYTGLSHKI GEVHDGAATM DWMEQEQERG
ITITSAATTC FWSGMQQQFP QHRINIIDTP GHVDFTIEVE RSLRVLDGAV VVLCGSSGVQ
PQTETVWRQA NKYEVPRLVF VNKMDRAGAN FRSVVQQLRD RLGANAVPLH MTIGAEDGFE
GVIDLIKMKS IHWNEADMGM TFEYGEVPED LLEECEEMRE YAVEAAAEAN DDLMEKYLET
GELSEDEIKA GLRARTLANE IVPVLGGSAF KNKGVQAVLD AVVEYLPAPT EVKAIEGTLI
DGETVDTRVA DDDAPFAALA FKIATDPFVG TLTFFRVYSG RLESGTAVYN SVKQKRERVG
RMVQMHSNNR EEIKEVLAGD IAAAIGLKDV TTGDTLCAES NKIVLERMEF PEPVISVAVE
PRTVPDQEKM AVALAKLAQE DPSFRVATDE ETGQTIISGM GELHLDIIVD RMRREFGVDA
NIGKPQVAYR ERITRTCEVE GKFVRQSGGR GQYGHVWIRF EPADDNNAEG LVFENEVVGG
AVPKEYIPAV EKGISEQMRN GVLAGYPLLG LKATIYDGSF HDVDSNEMAF KIAASIATKN
LAAEGGAVLL EPVMKVEVVT PEENMGDVVG DLNRRRGLIQ GMEECISGKV VRAEVPLAEM
FGYATDLRSA TQGRATFTME FQQYSEAPKN VADEIMARNG R
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