| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_0923 |
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| Symbol | rplL |
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| ID | 3965564 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | + |
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| Start bp | 1187077 |
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| End bp | 1187457 |
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| Gene Length | 381 bp |
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| Protein Length | 126 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 637919990 |
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| Product | 50S ribosomal protein L7/L12 |
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| Protein accession | YP_526397 |
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| Protein GI | 90020570 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0222] Ribosomal protein L7/L12 |
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| TIGRFAM ID | [TIGR00855] ribosomal protein L7/L12 |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.000276114 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 3 |
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| Fosmid unclonability p-value | 0.0000101769 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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| |
Sequence |
| Gene sequence | ATGGCTCTTT CTAAAGAAGA TATCTTAAAT GCAATTGCCG AAATGTCTGT TATGGACGTT
GTTGAGTTAG TTGCTGCAAT GGAAGAAAAA TTCGGCGTAT CTGCTGCTGC TGCTGTAGCT
GTAGCTGCTC CTGCTGCTGG CGGCGACGCT GGTGGTGCTG CTGCTGAGCA AACTGAATTC
GACGTTATCC TAGCTTCTGC TGGTGAGAAG AAAGTTAACG TTATCAAGGC TGTTCGTGGT
ATCACTGGTC TTGGTCTTAA AGAAGCTAAA GAATTGGTTG ACGGCGCTCC TAGCCCAATC
AAAGAAGGCG TTTCTAAAGA CGACGCAGAA GAAGCTAAGA AATTACTTGA AGAAGCTGGC
GCATCTGTCG AGCTTAAGTA A
|
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| Protein sequence | MALSKEDILN AIAEMSVMDV VELVAAMEEK FGVSAAAAVA VAAPAAGGDA GGAAAEQTEF
DVILASAGEK KVNVIKAVRG ITGLGLKEAK ELVDGAPSPI KEGVSKDDAE EAKKLLEEAG
ASVELK
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