Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sde_0915 |
Symbol | |
ID | 3965551 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharophagus degradans 2-40 |
Kingdom | Bacteria |
Replicon accession | NC_007912 |
Strand | + |
Start bp | 1180564 |
End bp | 1181562 |
Gene Length | 999 bp |
Protein Length | 332 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 637919977 |
Product | biotin--(acetyl-CoA-carboxylase) ligase |
Protein accession | YP_526389 |
Protein GI | 90020562 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0340] Biotin-(acetyl-CoA carboxylase) ligase |
TIGRFAM ID | [TIGR00121] birA, biotin-[acetyl-CoA-carboxylase] ligase region [TIGR00122] BirA biotin operon repressor domain |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 0.277179 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 1 |
Fosmid unclonability p-value | 0.000000181101 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | ATGACTGAGT CTTGGGGGCG GCTGTTAACT ATTCTTGCAA ATGGGGAGTG TCATTCTGGT GAGGCGCTTG GGGTTGAGCT AGGTGTTAGT CGCGCGGCTA TTTGGAAGCA AATTCAGGCG ATGGCACAAG TGGGGATTCA TGTCGAAAGC GTGCGCGGTG CTGGTTACTG CTTGCCCGGC GGAATGAGCC TGCTAAGTGA AGGCGAAATA TTGAAGGCGC TTGAAGGTAT GCCTGCAGGA GCTCAGGGGC AGCTGCAGTG TGTGGTGTAC TCGCAGCTTG ATTCTACCAA TGAGCGAGTA TTACAGCGCA TTCGAGCTGG CGAGTCTGGG CATGGCTACG CCTGTTTGGC CGAGCTGCAA TCTGCTGGTC GGGGCCGTCG GGGACGGCAG TGGCAAAGCC CCTACGGTCG CAATGTATAC CTCTCGCTCG GCTGGCGCTT CGAGCGCGGG GTGGCGGCTA TGGAGGGCTT GAGTTTAGCC ATTGGGGTAG CCGTGTGCAG GGCGCTTGAT AAAAATTTTT CGCTAAAAGC CGAATTGAAG TGGCCCAACG ATGTATTGCT CGCGGGGCGC AAGTTAGGGG GGATTTTGCT GGAGGTAGCA GGCGATTTAA GCGGTGAATG TTATGTTGTG GCGGGGGTTG GGCTAAATGT ATCTATGCCT AGCGCAGCTG CGCAAGCCAT TGATCAACCG TGGATTGACG TGGCCTCGTG TATCGAAAGT ATAGGGCTGA TAGATCGCAA CCAGCTGGCT GCCGCGCTTT TATTTGAATT AAGTTGTGTA TTAAGTGATT ACGAGCAGCG TGGTTTTGCT GCGTATAAAA ATGAGTGGAA AATGCGTTGC CCGCATATTG GGGCTAGTGT GCAACTTAGC TCTCATTCTA ATACCTTGGT GGGCGAAATG GTTGGTGTGG ATGATACGGG TGCGCTGTTG TTGTTGGTTG ATGGCGAATT AAAGCCCTAC AGTGGTGGCG AGCTAAGTTT AAGGCTGGCT AGCTCATGA
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Protein sequence | MTESWGRLLT ILANGECHSG EALGVELGVS RAAIWKQIQA MAQVGIHVES VRGAGYCLPG GMSLLSEGEI LKALEGMPAG AQGQLQCVVY SQLDSTNERV LQRIRAGESG HGYACLAELQ SAGRGRRGRQ WQSPYGRNVY LSLGWRFERG VAAMEGLSLA IGVAVCRALD KNFSLKAELK WPNDVLLAGR KLGGILLEVA GDLSGECYVV AGVGLNVSMP SAAAQAIDQP WIDVASCIES IGLIDRNQLA AALLFELSCV LSDYEQRGFA AYKNEWKMRC PHIGASVQLS SHSNTLVGEM VGVDDTGALL LLVDGELKPY SGGELSLRLA SS
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