| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_0908 |
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| Symbol | |
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| ID | 3965544 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | - |
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| Start bp | 1173172 |
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| End bp | 1173699 |
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| Gene Length | 528 bp |
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| Protein Length | 175 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 637919970 |
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| Product | soluble lytic murein transglycosylase-like |
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| Protein accession | YP_526382 |
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| Protein GI | 90020555 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0741] Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.000000000207022 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 1 |
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| Fosmid unclonability p-value | 0.000000101863 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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| |
Sequence |
| Gene sequence | ATGCTCCTTC CCTTTTGCCA CTCCTGTCTG GCGGAAGAAA TTGACCCCGA GCTTAAAGCC
AAACTCATGC AAGCGGTTGC CGAAGCAGAT AGCTTTGTGG ATGAGTTTGA TGCGCAAGTT
TGGCTAATGC AAAAATCAGC GGTATTGGAG CGCTTTGTAA AAGACCCCGA TGACCGATTA
TTCCTGCTAC GCCACATTCA CCGCGAAGCA AAGCGAGCCG ACCTACCGCC CGAGTTTGTA
TTAGCGGTTA TTCAAGTAGA AAGCCATTTT GACCAATTTG CACTTTCGCG CGTAGGCGCG
CGCGGCTTAA TGCAAATAAT GCCCTTTTGG AAAAACGAAA TTGGTAGAGA AACCGACAAC
CTAATGCACA TAGAAACCAA CCTGCGCTAT GGCTGTACCA TACTTAAACA CTACTTAGAA
CGCGCAAACG GCAACTGGGC CGAAGCGTTG GCGCGCTACA ACGGCAGCTA TGGCAAAATA
TGGTATGCAG AAAAGGTTAT GGTAGCCTGG CAAAAAAACT GGCGTTAA
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| Protein sequence | MLLPFCHSCL AEEIDPELKA KLMQAVAEAD SFVDEFDAQV WLMQKSAVLE RFVKDPDDRL
FLLRHIHREA KRADLPPEFV LAVIQVESHF DQFALSRVGA RGLMQIMPFW KNEIGRETDN
LMHIETNLRY GCTILKHYLE RANGNWAEAL ARYNGSYGKI WYAEKVMVAW QKNWR
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