| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_0906 |
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| Symbol | |
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| ID | 3965542 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | - |
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| Start bp | 1168671 |
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| End bp | 1171037 |
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| Gene Length | 2367 bp |
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| Protein Length | 788 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 637919968 |
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| Product | NdvB protein |
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| Protein accession | YP_526380 |
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| Protein GI | 90020553 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3459] Cellobiose phosphorylase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 1 |
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| Fosmid unclonability p-value | 0.00000016442 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGTTAAAAG CCATTAACAA CGGCGAACGC TATCAACTCA CTAGCCCTAC CGCTATGCCG
CAAAGCGCAT CGTTTTTATG GAATAAAAAA ATGATGATAC AAGTAAATTG CCGCGGCTAC
GCCGTTGCGC AATTTATGCA GCCAGAACCA GCCAAATACG CTTACGCACC CAATCTGGAA
GCAAAAACAT TTATGCAACC AGAGCAACCC TATTACGCGC ATCACCCCGG GCGCTTTTTC
TATATAAAAG ATGAAGAGAC AGGCGAGATT TTTTCGGCAC CCTACGAGCC TGTGCGCAGC
CAGCTGAACA ACTTTAGCTT TAACGCAGGC AAGAGCGATA TAAGCTGGCA TATTGCCGCT
TTAGGCATTG AAGTAGAGCT ATGTCTTAGC CTGCCGGTGG ACGATGTAGT AGAATTGTGG
GAACTAAAAA TAAAAAACGG CGGCGCGCAA CCTCGTAAAC TCAGTATTTA CCCGTACTTT
CCTGTGGGTT ACATGTCGTG GATGAATCAA TCTGGTGACT ACAGCCAAAC CGCCGGCGGC
ATTATTGCCA GCTGCGTAAC GCCTTATCAA AAAGTCGCCG ACTACTTTAA GAATAAAGAC
TTTAAAGATA AAACGTTCTT TCTTCACGAA ACCGCCCCAG CAGCATGGGA AGTAAACCAG
AAAAACTTCG AAGGCGAAGG CGGGTTGCAC AACCCCAACG CCATACAACA AGAAACGCTG
GGCTGCGGCA ACGCATTGTA CGAAACGCCC ACAGCGGTAT TGCAATACCG CCGCGAACTT
GCAGCGCAAG AGCAGCAAAC CTTTCGCTTT ATTTTTGGCC CAGCATTTGA CGAGAGCGAA
GCCATTGCAC TGCGCAATAA GTATTTATCT GCCGAAGGTT TTGCCAAAGC AAAAAGCGAA
TACCAAACCT ATATAACGAG CGGCAAAGGC TGCTTGCAAA TTAACACCCC AGACCCAGAA
CTAAACAACT TTGTAAACCA CTGGCTACCG CGCCAAGTGT TTTATCACGG CGATGTAAAC
CGGTTAACCA CCGACCCGCA AACGCGCAAT TATATTCAAG ACAATATGGG CATGAGCTAC
ATTAAGCCCA ACATTACGCG GCAGGCGTTT TTACATGCCT TAAGCCAGCA GGAAGAAAGC
GGTGCAATGC CCGACGGCAT TTTATTGCTT GAAGGCGCCG AGCTTAAATA CATAAACCAA
ATACCCCATA CCGATCACTG CGTTTGGCTG CCGGTGTGTA TGCAAGCCTA TTTGGATGAA
ACCAATGACT ACGCCCTATT AGACGAAATA GTACCCTATG CGAGTGGCGA GAAGCGCGAA
ACTGTTGAGC AACATATGCA TCACGCTATG CGCTGGCTTT TGCAAGCACG CGACGAACGC
GGCCTAAGCT TTATCGCACA GGGCGACTGG TGCGACCCCA TGAACATGGT GGGCTACAAG
GGCAAAGGGG TATCCGGCTG GCTTTCAGTC GCTACCGCTT ATGCATTAAA CCTGTGGGCA
GATGTTTGCG AACAACGGCA GCAAAACAGT TGCGCCAACG AATTTAGACA GGGCGCTAAA
GATATAAACG CGGCGGTAAA CAAGCATATT TGGGATGGCG AATGGTTTGG CCGCGGCATT
ACAGATGACG GCGTACTGTT TGGCACCAGC AAAGATAAAG AAGGCAGAAT TTTTCTAAAC
CCACAAAGCT GGGCAATACT TGGCGGCGCC GCCGACGAAC AAAAAATCCC ATGCCTGCTA
GACGCAGTAG AGCAACAACT GGAAACCCCT TACGGCGTAA TGATGCTGGC CCCCGCGTTT
ACCGCCATGC GCGATGACGT AGGCCGAGTT ACCCAAAAAT TCCCAGGCTC TGCAGAAAAC
GGCTCTGTTT ATAATCACGC GGCGGTGTTT TATATATTTA GCTTGTTATC CATTGGCGAG
AGCGAACGCG CATATAAACT GCTACGCCAA ATGCTGCCTG GGCCAGATGA AGCCGATCTT
TTACAGCGCG GCCAACTGCC AGTATTCATA CCTAACTATT ATCGCGGCGC ATACTACCAG
CACCCCCGCA CCGCCGGTCG CTCTAGCCAG CTCTTTAATA CGGGTACAGT CTCGTGGGTT
TACCGCTGCT TAATTGAAGG GGTATTCGGC TTGAAAGGCT CGCCACAAGG CTTAGTTGTA
CAACCGCAAC TGCCTGTCGC CTGGCAAACA GCAGAAGCCG TTAGGGAATT TAGAGGCGCA
ACGTTTAACG TGAGCTACCG CAAAAGCAGC GATATAAAAG AAATGGAAAT ACAGCTAAAT
GAATCGGTAA TAAGTGGCAA CACCATCTCC GACATCACCG CCGGCGCGAC CTATCAATTA
ACCGTTCTAT TACCTGCCAC ACACTAA
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| Protein sequence | MLKAINNGER YQLTSPTAMP QSASFLWNKK MMIQVNCRGY AVAQFMQPEP AKYAYAPNLE
AKTFMQPEQP YYAHHPGRFF YIKDEETGEI FSAPYEPVRS QLNNFSFNAG KSDISWHIAA
LGIEVELCLS LPVDDVVELW ELKIKNGGAQ PRKLSIYPYF PVGYMSWMNQ SGDYSQTAGG
IIASCVTPYQ KVADYFKNKD FKDKTFFLHE TAPAAWEVNQ KNFEGEGGLH NPNAIQQETL
GCGNALYETP TAVLQYRREL AAQEQQTFRF IFGPAFDESE AIALRNKYLS AEGFAKAKSE
YQTYITSGKG CLQINTPDPE LNNFVNHWLP RQVFYHGDVN RLTTDPQTRN YIQDNMGMSY
IKPNITRQAF LHALSQQEES GAMPDGILLL EGAELKYINQ IPHTDHCVWL PVCMQAYLDE
TNDYALLDEI VPYASGEKRE TVEQHMHHAM RWLLQARDER GLSFIAQGDW CDPMNMVGYK
GKGVSGWLSV ATAYALNLWA DVCEQRQQNS CANEFRQGAK DINAAVNKHI WDGEWFGRGI
TDDGVLFGTS KDKEGRIFLN PQSWAILGGA ADEQKIPCLL DAVEQQLETP YGVMMLAPAF
TAMRDDVGRV TQKFPGSAEN GSVYNHAAVF YIFSLLSIGE SERAYKLLRQ MLPGPDEADL
LQRGQLPVFI PNYYRGAYYQ HPRTAGRSSQ LFNTGTVSWV YRCLIEGVFG LKGSPQGLVV
QPQLPVAWQT AEAVREFRGA TFNVSYRKSS DIKEMEIQLN ESVISGNTIS DITAGATYQL
TVLLPATH
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