Gene Sde_0898 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSde_0898 
Symbol 
ID3965495 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharophagus degradans 2-40 
KingdomBacteria 
Replicon accessionNC_007912 
Strand
Start bp1161956 
End bp1162330 
Gene Length375 bp 
Protein Length124 aa 
Translation table11 
GC content41% 
IMG OID637919960 
Producttranslation elongation factor Tu 
Protein accessionYP_526372 
Protein GI90020545 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones48 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0000000668063 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGACTGATG CAACAGCTCC TACCATGCGC CAAAAATATA TGCGCATTAA AACTGTGTTC 
CTAATGGGTT ACGCAGCGCT TTTAGCACTT TTTATATTTT GGAATATTTC TCGCCCTTCG
GGCTTTAACA TTACTATTTT GCTTATTCAG TGCGTACCGC TATTGGCATT TTTGCCCGGC
ATATTACAAA ACCACTACCG CACCTATAGT TGGGTGTGTT TTATTATTTT ATTTTATTTT
GTAAAAGCCG TAGAAGGTGC GTTCGCCTCT ACCGCCAACT TTACCGATGG TATTTTTATT
GGTTTAACCG TGTATTTATT TGTTTGCGCA ATGATGGCTT CTCGCTGGGC ACAGCGCATG
CTCTACCAAG ATTAA
 
Protein sequence
MTDATAPTMR QKYMRIKTVF LMGYAALLAL FIFWNISRPS GFNITILLIQ CVPLLAFLPG 
ILQNHYRTYS WVCFIILFYF VKAVEGAFAS TANFTDGIFI GLTVYLFVCA MMASRWAQRM
LYQD