Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sde_0876 |
Symbol | |
ID | 3968810 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharophagus degradans 2-40 |
Kingdom | Bacteria |
Replicon accession | NC_007912 |
Strand | + |
Start bp | 1135167 |
End bp | 1135766 |
Gene Length | 600 bp |
Protein Length | 199 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 637919938 |
Product | N-acetyl-anhydromuranmyl-L-alanine amidase |
Protein accession | YP_526350 |
Protein GI | 90020523 |
COG category | [V] Defense mechanisms |
COG ID | [COG3023] Negative regulator of beta-lactamase expression |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 0.116564 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.0226174 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGACATCCA GCATAGAGTC CCAACGCTTT AGTGTGAATG CCATTGAAGA AGGCTGGTGG CAAAAAGCAC TTAAACTCCC TTCCCCAAAC TTTAATGCCC GCCCGCCCGG TAGCGAAGTA AGCTTGTTGG TTATTCACAA TATTAGCCTT CCGCCCGGCG GGTTTGGTGG TGGCTACGTA GAAGCGTTCT TTCTTAACAA GCTTAACCCC AGTGACCACC CTTATTTTGA AACCATTGCT GAAGTAGAAG TTTCTGCCCA CTGCTTTATT GACCGCCATG GTCATGTCAC TCAGTTTGTA TCTTTTGACG ACAGGGCTTG GCATGCAGGA CGATCGGCAT TTAATGGCGA GCAGGAATGT AACGACTTTG GAATAGGCAT AGAGCTGGAG GGGACTGATA GCCTCGAGTA CACTGTAGAG CAATACACAA GCTTGGTGGA GTTGAGTGCT GTTTTGCTCG ATAAATACCC AAAACTTACT CTGGATAGAA TCGTGGGTCA TTGCGACATA GCGCCAGAGC GCAAAACCGA CCCAGGTGAA GCATTTGACT GGCAAAACTA TAAAAGCGAA TTAGCTAAAC GCCTGCAGGA AAGAGATTAA
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Protein sequence | MTSSIESQRF SVNAIEEGWW QKALKLPSPN FNARPPGSEV SLLVIHNISL PPGGFGGGYV EAFFLNKLNP SDHPYFETIA EVEVSAHCFI DRHGHVTQFV SFDDRAWHAG RSAFNGEQEC NDFGIGIELE GTDSLEYTVE QYTSLVELSA VLLDKYPKLT LDRIVGHCDI APERKTDPGE AFDWQNYKSE LAKRLQERD
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