| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_0874 |
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| Symbol | |
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| ID | 3968808 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | - |
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| Start bp | 1131250 |
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| End bp | 1132137 |
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| Gene Length | 888 bp |
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| Protein Length | 295 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 637919936 |
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| Product | carboxylating nicotinate-nucleotide pyrophosphorylase |
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| Protein accession | YP_526348 |
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| Protein GI | 90020521 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0157] Nicotinate-nucleotide pyrophosphorylase |
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| TIGRFAM ID | [TIGR00078] nicotinate-nucleotide pyrophosphorylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 46 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.359858 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGGCCTT CAGCCAAATT CATCTTAGTT ATAAGCAAGC CCATGAACAT ACAATTAGAC
TCTATACGTG CAGACATCAC CCGCGCCGTT CGCGAAGCCC TAGCCGAAGA TATAGGCGAC
GGCGACATTA CAGCCATGCT AATCCCCGGC GATCAAATCA ACACCGCCGA GATTATCACC
CGCGAAGATT GCACTTTATG TGGCCAAGCA TGGCTTGAAG AAACTTTTGC CCAACTTGGC
GGCTTAGACA GCATTGAGTG GCACGCACAG GATGGCGACC AAGTAACCGC TGGCAGCAAG
CTTGTCACCC TAAGGGGCAA TGCCCGCCGC CTGCTTACCG GTGAGCGCAC TGCCTTAAAC
TTTATTCAGC TGCTTTCTGG CACCGCCACC AAAGCGCACC AGTTCGCGCA ATTACTACCG
AACAGCAACA TTAAAATACT AGACACCCGC AAAACCATTC CCGGCCTGCG CACCGCACAA
AAATACGCCA TAACCTGCGG CGGCTGCCAC AACCACCGCA TAGGCCTTTA CGATATGTTC
CTAATTAAAG AGAACCATAT AGCCGCTTGC GGCGGCATTA CTGCGGCAGT AGAGAAGGCA
CGGGAGATTG CGCCAGACAA ACGCGTGGAA GTGGAGGTAG AAACAAGGGA AGAGCTGCTA
GAAGCCATTG CGGCGAGGGC GGATGTGGTT ATGTTGGATA ACTTTGATGC CGATTCACTG
CAATATGCAA TGAACCTAGA CAAACATAAC ACTCAGTACG AGCTTTCCGG TAATTTGGAC
TTAGAGAATT TAAAAACAAT TGCCAGTCTT AATATCGACT TTTGCTCATT TGGCGCGCTA
ACCAAACATG TTAGCGCGGT GGATTTATCT TTGCGGGTTC ATAGTTAA
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| Protein sequence | MRPSAKFILV ISKPMNIQLD SIRADITRAV REALAEDIGD GDITAMLIPG DQINTAEIIT
REDCTLCGQA WLEETFAQLG GLDSIEWHAQ DGDQVTAGSK LVTLRGNARR LLTGERTALN
FIQLLSGTAT KAHQFAQLLP NSNIKILDTR KTIPGLRTAQ KYAITCGGCH NHRIGLYDMF
LIKENHIAAC GGITAAVEKA REIAPDKRVE VEVETREELL EAIAARADVV MLDNFDADSL
QYAMNLDKHN TQYELSGNLD LENLKTIASL NIDFCSFGAL TKHVSAVDLS LRVHS
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