Gene Sde_0871 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSde_0871 
Symbol 
ID3968805 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharophagus degradans 2-40 
KingdomBacteria 
Replicon accessionNC_007912 
Strand
Start bp1127810 
End bp1128379 
Gene Length570 bp 
Protein Length189 aa 
Translation table11 
GC content43% 
IMG OID637919933 
Productcarbohydrate kinase, thermoresistant glucokinase 
Protein accessionYP_526345 
Protein GI90020518 
COG category[R] General function prediction only 
COG ID[COG0663] Carbonic anhydrases/acetyltransferases, isoleucine patch superfamily 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones54 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTATTA GCATACACCC CTCGGCAATC GTAGATAACA ACGTTAAAAT TGGTCAAGGA 
ACCAAGATTT GGCACTGGAC ACACATATCC TCTGGAGCCT CGATAGGGGA ATTCTGCACT
TTAGGTCAAA ATGTATATAT CGCGCCCAAT GTTCATATTG GTAATCATGT GAAGATACAG
AACAACGTGT CGATATACTC AGGTATAAAC ATACACGACA ACGTCTTCAT TGGCCCTAGC
GCAGTATTTA CAAACGTTAT TAACCCACGA GCTAATATAG AAAGAAAACA TGAATTTAAA
ACAACCACTA TAGAAGAAGG AGCTTCCATC GGCGCCAATG CCACAATAAT CTGTGGCAAT
ACAATTGGAG CATACAGCTT AATCGGCGCT GGAGCGGTTG TAACCAAATG CATTCCAGCC
CACGCCCTTG TGCAAGGAAC CCCTGCGAGA CAGCAGGGAT GGGTAAGCAA AGCTGGCCTG
AAACTAGCAA TTAAAAACAA TAGAGCACTA TGCCCAGAAA CAGGGGAACG CTATATACTA
AACGAAGGAA TTCTAACACC AGCTTATTAG
 
Protein sequence
MSISIHPSAI VDNNVKIGQG TKIWHWTHIS SGASIGEFCT LGQNVYIAPN VHIGNHVKIQ 
NNVSIYSGIN IHDNVFIGPS AVFTNVINPR ANIERKHEFK TTTIEEGASI GANATIICGN
TIGAYSLIGA GAVVTKCIPA HALVQGTPAR QQGWVSKAGL KLAIKNNRAL CPETGERYIL
NEGILTPAY