Gene Sde_0857 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSde_0857 
SymbolargJ 
ID3965206 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharophagus degradans 2-40 
KingdomBacteria 
Replicon accessionNC_007912 
Strand
Start bp1113874 
End bp1115094 
Gene Length1221 bp 
Protein Length406 aa 
Translation table11 
GC content47% 
IMG OID637919919 
Productbifunctional ornithine acetyltransferase/N-acetylglutamate synthase protein 
Protein accessionYP_526331 
Protein GI90020504 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1364] N-acetylglutamate synthase (N-acetylornithine aminotransferase) 
TIGRFAM ID[TIGR00120] glutamate N-acetyltransferase/amino-acid acetyltransferase 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTGTTG GTCCAGATAT TTGGCCGGAA ATGCACATTA TTGATGGTGT GCGTATTGGC 
GTTGCCCAAG GCGGTATTAA GCGTGCTGGT CGCGATGATG TTACTTTGTT TGAAATTTGC
GAAGGCGCGC GCGTAGCTGG GGTTTTTACG CAAAATGCGT TTTGTGCCGA GCCGGTAAAA
ATTGCCAAGC AGCATTTGGC AAAACAAAAT GTACGCTACT TATTAATTAA TTCCGGTAAT
GCCAATGCCT GTACGGGCAA ACTAGGTAAT GCTGCTGCAA TGAAAACTTG CAACGCCCTA
GCGGGGCTTA CCCAGGTAGA TGCCAGTTCT GTTATTCCTT TTTCTACAGG TGTAATTGGC
GAGCTATTGC CAGCAGATAA AATTATTAAC GTGTTGCCGC AAGCCATAGA GTCTTTAGAT
GCCGACAACT GGACGCGTGC CGGTCGCTCT ATAATGACAA CCGATACTCG CCCTAAAGGC
GCTTCGTGTG AAGTTAACCT TGGCGATAAG GTCGTTAAAA TTACCGGTAT TTCCAAGGGT
GCCGGTATGA TCAACCCCAA TATGGCGACC ATGCTGGCTT ATATTGCAAC AGATGCTGAT
GTAGATCAGG CATTGTTAAA CAAGCTTGCA AAGCGCGCGG CTAATTTATC TTTTAATCGC
ATAACCATTG ATGGCGACAC CTCCACTAAC GACGCATGTA TGGTGATAGC AACGGGCAAA
GCAGGTAATG CAACGCTTGT GGATGAGGCT TCACCAGAGG CAGAAACGTT TGCTTTTGCT
CTTATCGATG TATATCAGCA GTTAGCCCAG CAAATTGTTC GCGATGGCGA GGGGGCGACT
AAGTTTATTT CTGTGCATGT GCGCGGCGGT GCTACACATC AAGAGTGTGT AGATGTTGCT
TATGCAATTG CTCATTCACC ACTCATTAAA ACGGCTATGT TTGCTTCCGA CCCAAACTGG
GGGCGCATTA TTTGTGCAAT AGGTTACGCC GGTGTGCCTA ACCTCGACGT AGATGGTGTA
AAAGTTTGGT TAGACGAAAC GCTTATTGTG GAAGATGGTG GTCGTGCGGC TTCTTATACT
GAAGAGCAAG GCCAAGCCGT AGTCAGCAAG GCTGAGTTTG CTATTAATGT GGATTTAGGG
CGTGGCGATT TTGAAGACGT TATTTGGACA TCTGACTTAT CTCATGAATA TATCCGAATA
AATGCCGAAT ACCGAAGCTA A
 
Protein sequence
MAVGPDIWPE MHIIDGVRIG VAQGGIKRAG RDDVTLFEIC EGARVAGVFT QNAFCAEPVK 
IAKQHLAKQN VRYLLINSGN ANACTGKLGN AAAMKTCNAL AGLTQVDASS VIPFSTGVIG
ELLPADKIIN VLPQAIESLD ADNWTRAGRS IMTTDTRPKG ASCEVNLGDK VVKITGISKG
AGMINPNMAT MLAYIATDAD VDQALLNKLA KRAANLSFNR ITIDGDTSTN DACMVIATGK
AGNATLVDEA SPEAETFAFA LIDVYQQLAQ QIVRDGEGAT KFISVHVRGG ATHQECVDVA
YAIAHSPLIK TAMFASDPNW GRIICAIGYA GVPNLDVDGV KVWLDETLIV EDGGRAASYT
EEQGQAVVSK AEFAINVDLG RGDFEDVIWT SDLSHEYIRI NAEYRS