Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sde_0855 |
Symbol | |
ID | 3965204 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharophagus degradans 2-40 |
Kingdom | Bacteria |
Replicon accession | NC_007912 |
Strand | + |
Start bp | 1110048 |
End bp | 1110980 |
Gene Length | 933 bp |
Protein Length | 310 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 637919917 |
Product | Fe-S type hydro-lyases tartrate/fumarate alpha region |
Protein accession | YP_526329 |
Protein GI | 90020502 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0739] Membrane proteins related to metalloendopeptidases |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.000000000487918 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | 34 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAAAATTA TCGTCGTAAG TAAACGTCAC GGAAACACTC GCAGCTTTAC GCTGGGAGCG TGGAAGCGTG CGCTTATCTC AGCCTGTATA TTGGGGCTGC CGGTGGGTAT AACGCTAGGC GCCTTGAAGT ACTTTGACAC CGAGTCCGAC TCCGAATTTC TCAACCCAGG ATCTCGTCAA GCATGGGTAG CCGCGCTAAA CGAGCAAGCT CAGCAAGTAG AGCAAGCGCG ACTGCAAACA GAGCAAAAAC TCGCGGCATT AACCATGCGA GTGGCCGAAC TGCAGGCTAG GCTGGTTAGG ATTGATGCAC TGGGTGAGCG ACTAACCGGT ATGGCTCACC TCGATAACGG TGAGTTCGAT TTTAGTCAGA TGCCAGCTCT AGGTGGCCCC GAGCAGGCAA TAGAAGAAGA ACACGTTACC GCCCCCGATT TTCAAGCTAC CCTCGATCAG CTTGCCTCTC AAATAGAAGA CCGCCAACAG CAGCTTAATA CCCTCGAAGC ACTGCTTGCC AACCGCAAGT TACAAGATGA AGTGTTTTTG GCTGGGCGCC CTATTAATAA AGGGTGGATG TCCTCCCGTT TTGGCCGCCG CACAGACCCG TTTACAGGGC GTGTAGCATG GCATGAAGGT GTCGATTTTG CGGGTAAAGA AGGCAGCGAT ATTGTCGCGG TGGCTTCTGG GGTAGTTACT TGGTCTAGCG AGCGCAGCGG TTACGGTAAC TTGGTAGAAA TTAACCATGG TAACGGCTAT AAAACCCGTT ACGGCCACTG CAAAGAAAAT CTTGTTAAAG TGGGCGATGT TGTTAAGAAA GGCCAAGTTA TAGCTTTAAT GGGTTCAAGT GGCCGTTCAA CAGGCCCCCA TGTACATTTC GAAGTCTACA AGCACGGTCG CGCAGTCGAC CCATCTACTT ATATTCATCG GGCAAGTCGT TAA
|
Protein sequence | MKIIVVSKRH GNTRSFTLGA WKRALISACI LGLPVGITLG ALKYFDTESD SEFLNPGSRQ AWVAALNEQA QQVEQARLQT EQKLAALTMR VAELQARLVR IDALGERLTG MAHLDNGEFD FSQMPALGGP EQAIEEEHVT APDFQATLDQ LASQIEDRQQ QLNTLEALLA NRKLQDEVFL AGRPINKGWM SSRFGRRTDP FTGRVAWHEG VDFAGKEGSD IVAVASGVVT WSSERSGYGN LVEINHGNGY KTRYGHCKEN LVKVGDVVKK GQVIALMGSS GRSTGPHVHF EVYKHGRAVD PSTYIHRASR
|
| |