| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_0854 |
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| Symbol | lpxC |
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| ID | 3965203 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | + |
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| Start bp | 1108779 |
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| End bp | 1109690 |
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| Gene Length | 912 bp |
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| Protein Length | 303 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 637919916 |
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| Product | UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase |
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| Protein accession | YP_526328 |
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| Protein GI | 90020501 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0774] UDP-3-O-acyl-N-acetylglucosamine deacetylase |
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| TIGRFAM ID | [TIGR00325] UDP-3-0-acyl N-acetylglucosamine deacetylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.0000000000000448339 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGATCAAGC AAAGAACCTT AAAAAACGAA ATTCGCGCTA CTGGAGTTGG GTTACACACA
GGTCAAAAAG TGTATTTGAC CCTGTTACCA GCACCTGTTG ATGCCGGAAT AGTTTTTCGC
CGGGTAGATT TGAATCCTGT GGTGGAAATT CCTGCGAAAG CGGCCAATGT TGGCGATACC
ACTCTGTCTA CAACCCTTAT TCAAGATGGT GTGCGGGTGT CTACCGTAGA GCATCTGCTA
TCTGCAATGG CGGGGTTGGG CATCGATAAT GCCATTATTG AAGTAAGTGC CGACGAAGTG
CCAATTATGG ACGGCAGTGC CGGCCCATTT GTGTTTCTAA TTCAGTCTGC TGGCATCGTT
GAGCAAAATG CGGCCAAAAA GTTTATTCGT ATTAAAAAGC CTATCACCGT TCAAGATGGC
GATAAAAGCG CAAGTTTTCT GCCTTTTGAA GGTTTTAAGG TTTCTTTTAC CATTGATTTC
GACCACCCCG TATTTCGCGG GCGCAAATTA GATGCCACGG TCGATTTTTC AAGCACTTCG
TTTGTAAAAG AGGTGTCTCG TGCGCGCACT TTCGGGTTTA TGCACGAAAT TGAATATTTG
CGCTCCAAAG GCTTGGCCAA AGGCGGCAGC GTAGATAACG CCATTGTGGT TGATAAGTTT
CGAATTTTGA ACGAAGACGG TCTGCGCTAC GAAGATGAGT TTGTAAAACA CAAAATTCTA
GATGCAATTG GCGATTTGTA CTTATTGGGT ACAAGCCTTA TTGGTGAATA TAAGGCGTAC
AAGTCTGGTC ACGGCTTGAA CAATAAATCG CTTTTGGAGT TAATCAAGCA GGAAGATGCT
TGGGAAATGG TAACTTTCGA AGATGACGAA GTTGCGCCAA TCTCTTACAT TAAGCCGTTA
CTAGCTGTGT AG
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| Protein sequence | MIKQRTLKNE IRATGVGLHT GQKVYLTLLP APVDAGIVFR RVDLNPVVEI PAKAANVGDT
TLSTTLIQDG VRVSTVEHLL SAMAGLGIDN AIIEVSADEV PIMDGSAGPF VFLIQSAGIV
EQNAAKKFIR IKKPITVQDG DKSASFLPFE GFKVSFTIDF DHPVFRGRKL DATVDFSSTS
FVKEVSRART FGFMHEIEYL RSKGLAKGGS VDNAIVVDKF RILNEDGLRY EDEFVKHKIL
DAIGDLYLLG TSLIGEYKAY KSGHGLNNKS LLELIKQEDA WEMVTFEDDE VAPISYIKPL
LAV
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