| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_0852 |
|---|
| Symbol | |
|---|
| ID | 3965201 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Saccharophagus degradans 2-40 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007912 |
|---|
| Strand | + |
|---|
| Start bp | 1105921 |
|---|
| End bp | 1107150 |
|---|
| Gene Length | 1230 bp |
|---|
| Protein Length | 409 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 637919914 |
|---|
| Product | cell division protein FtsA |
|---|
| Protein accession | YP_526326 |
|---|
| Protein GI | 90020499 |
|---|
| COG category | [D] Cell cycle control, cell division, chromosome partitioning |
|---|
| COG ID | [COG0849] Actin-like ATPase involved in cell division |
|---|
| TIGRFAM ID | [TIGR01174] cell division protein FtsA |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.0000127132 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 32 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCAAATG CAAACGGGGG CAAAATGATT GTCGGCCTAG ATATCGGAAC GTCTAAGGTT
GTTGCGATTG TCGGGGAGAT ATCAGCCGAA GGCGAACTAT CGATAGTTGG TATTGGCTCG
CATAAATCGG TAGGCCTGAA AAAAGGCGTG GTGGTGAATA TTGAATCCAC GGTGCAAAGC
ATTCAGCGCG CTATTGAAGA GGCTGAATTG ATGGCTGGCT GCTCTATCCA CTCGGTATAC
GCCGGTATTG CTGGTAATCA TATTCGCAGC TTGAATTCGC ACGGTATTGT TGCAATTAAA
GATCGCGAAG TATTCGCGCA GGATTTAGAT CGCGTTATTG ACGCTGCACA GGCCGTGGCT
ATTCCTGCCG ATCAGCGCAT ATTACATATT CTGCCGCAAG AATATTTAAT TGATGAACAA
GAAGGCGTTA AAGAGCCGCT AGGCATGTCT GGTGTACGTT TAGAAGCCAA AGTGCATTTG
GTAACTTGCG CCGTAAATGC ATCGCAAAAC ATTGAGAAGT GTATTCGTCG CTGCGGCCTT
GAAGTAGAAG ATATTATTTT GGAGCAGCTG GCTTCAAGTT ATGCAGTGCT TACCGACGAC
GAAAAAGAGC TCGGTGTATG TATGGTCGAT ATAGGTGGCG GTACAACCGA TATCGCTATC
TTTACCGAGG GTGCGATTCG CCATACGGGC GTTATCCCCA TTGCAGGGGA CCAAGTGACG
AACGATATTG CAATGGCGTT GCGCACGCCT ACGCAATATG CCGAGGAAAT AAAAATTAAA
TACGCGTGTG CGCTGGCAAA ATTAACCGGC GCCGAAGAAA CAATAAAAGT GCCGAGTGTT
GGCGATAGAC CCGCGAGGGA CTTATCTCGC CAAGCTTTGG CTGAAGTTGT GGAGCCGCGT
TATGACGAAT TGTTTACGCT TGTACAAGCA GAGCTTCGTC GCAGTGGGTT TGAAGATATG
GTTGCAGCCG GCATTGTGTT AACTGGCGGC ACCTCCAAAA TGGAGGGCGT GGTTGATTTG
GCTGAAGAGA TTTTCCATAT GCCTGTGCGC TTGGGCGCGC CTCAAGGTGT GAAAGGCTTA
AAAGATATTG TAACTAACCC AATATATTCA ACCGGCGTTG GCTTGTTGCT ATACGGGGCG
GAACAACAAA AAGGTGAAAG AGCTCACTCT ACTCCGTCAG GAGAAAGTGC AGTTAGTCGT
TTGAAATCTT GGTTTCAGCG CAATTTTTAA
|
|---|
| Protein sequence | MANANGGKMI VGLDIGTSKV VAIVGEISAE GELSIVGIGS HKSVGLKKGV VVNIESTVQS
IQRAIEEAEL MAGCSIHSVY AGIAGNHIRS LNSHGIVAIK DREVFAQDLD RVIDAAQAVA
IPADQRILHI LPQEYLIDEQ EGVKEPLGMS GVRLEAKVHL VTCAVNASQN IEKCIRRCGL
EVEDIILEQL ASSYAVLTDD EKELGVCMVD IGGGTTDIAI FTEGAIRHTG VIPIAGDQVT
NDIAMALRTP TQYAEEIKIK YACALAKLTG AEETIKVPSV GDRPARDLSR QALAEVVEPR
YDELFTLVQA ELRRSGFEDM VAAGIVLTGG TSKMEGVVDL AEEIFHMPVR LGAPQGVKGL
KDIVTNPIYS TGVGLLLYGA EQQKGERAHS TPSGESAVSR LKSWFQRNF
|
|---|
| |