| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_0834 |
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| Symbol | |
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| ID | 3965790 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | + |
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| Start bp | 1086256 |
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| End bp | 1086996 |
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| Gene Length | 741 bp |
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| Protein Length | 246 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 637919896 |
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| Product | hypothetical protein |
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| Protein accession | YP_526308 |
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| Protein GI | 90020481 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.0000087146 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGACAGTTG TTAAAGGTAG CAAACAGCAA AATTTGCGCG TGGTGCCCCA TCGGCCATGG
CTGCGGGTGC TATACGTTTT TATAACTGTA TTAATTACCG CGTCTGCAGC TGTTGGGGCC
TATTATTTTG GCTTCAAACA GGGCATGGCT GAGCAAGAAG CGGCGTTAGC TCAAATTTCT
TCGCTTAGTT CCGAGCTAGA TAGCAAAAGT GCAGCCCTTA GAGCGGTCGA GCAAGAGTTG
GCCAATATCC GCCTTGGGGC AGAGGTAGAC CGACAGTCTA GTGAGGATGT TCGCCAAGAG
GTCATTGCGC TTAAAGAGCA ACTCGCCGCG CTTGAGGCCG ACAATAGCTT CTACCGTAAT
TTAATGGCGC CAACAGAAAA TAAGCGTGGC CTCACCTTTG GGGCAATTGA GCTTAGCGAT
ACCGATGCTG GGCGCACGTA TCACTACAAG TTTGTAATGC AGCAGCTAGC CACTAATCAC
GAGCTACTTA ACGGTTCGCT AGAGGTGGTG GTTGTAGGTA AGCAAAATGA TTTAGAAGCG
CGTTATTATT TGAGTGATTT GTCCTCTTCT GTAAGCGATA AAACCGTTAA GCTGCGCTTC
AAATATTTTC AAACAATAGA GGGCGATTTG GTTCTGCCCG TAGGGTTCGA TCCAGAGCGC
ATAGAGCTTA CAGCCCGATC CACGGGTAAA AATGCAGTAA CCATAGAAAA ACGATTTGGC
TGGTTAGTAG AGGAGACTTA A
|
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| Protein sequence | MTVVKGSKQQ NLRVVPHRPW LRVLYVFITV LITASAAVGA YYFGFKQGMA EQEAALAQIS
SLSSELDSKS AALRAVEQEL ANIRLGAEVD RQSSEDVRQE VIALKEQLAA LEADNSFYRN
LMAPTENKRG LTFGAIELSD TDAGRTYHYK FVMQQLATNH ELLNGSLEVV VVGKQNDLEA
RYYLSDLSSS VSDKTVKLRF KYFQTIEGDL VLPVGFDPER IELTARSTGK NAVTIEKRFG
WLVEET
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