Gene Sde_0831 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSde_0831 
Symbol 
ID3965787 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharophagus degradans 2-40 
KingdomBacteria 
Replicon accessionNC_007912 
Strand
Start bp1082669 
End bp1083094 
Gene Length426 bp 
Protein Length141 aa 
Translation table11 
GC content46% 
IMG OID637919893 
Producthypothetical protein 
Protein accessionYP_526305 
Protein GI90020478 
COG category[S] Function unknown 
COG ID[COG1981] Predicted membrane protein 
TIGRFAM ID[TIGR00701] conserved hypothetical integral membrane protein 


Plasmid Coverage information

Num covering plasmid clones43 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGTGGG TTAAAGCCTT ACATATTGTT TCTGTTATTT GCTGGTTTGC AGCCTTATTT 
TATCTGCCAC GGCTTTTTGT GTATCACGCC ATGAGTGAAG ACACCATTAG CAAAGAACGA
TTTAAAACAA TGGAACGCAA GCTATACCGC GGTATTGCCA CGCCCTCGAT GATTGCCACC
ATTATTTTTG GCGGCTGGAC AGCAAGCTAC GCGTGGGATT ACTACAGCGG CAGCACCTGG
TTTTGGATAA AAATGGCGCT GGTGGTTTTA CTGATTGGCT ACCACCACAT GTGCGCAAAA
TACATGCGCG CATTTAGAGA TGACAAAGCC GTACCCGGGC ATGTTTTTTT TAGATGGTTC
AATGAATTCC CGGTACTGCT ACTTATTGCT GTAGTAATAC TCGCGGTGGT TAAGCAGCCG
GTATAA
 
Protein sequence
MLWVKALHIV SVICWFAALF YLPRLFVYHA MSEDTISKER FKTMERKLYR GIATPSMIAT 
IIFGGWTASY AWDYYSGSTW FWIKMALVVL LIGYHHMCAK YMRAFRDDKA VPGHVFFRWF
NEFPVLLLIA VVILAVVKQP V