| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_0828 |
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| Symbol | |
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| ID | 3967726 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | - |
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| Start bp | 1079141 |
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| End bp | 1079794 |
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| Gene Length | 654 bp |
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| Protein Length | 217 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 637919890 |
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| Product | thiamine-phosphate diphosphorylase |
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| Protein accession | YP_526302 |
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| Protein GI | 90020475 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0352] Thiamine monophosphate synthase |
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| TIGRFAM ID | [TIGR00693] thiamine-phosphate pyrophosphorylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCCCCACA ACAAACACAC CGTTTACGCA ATTACCGACG CCACCCTTAT GCCCACCACC
GCCAGCCTAT GCCACCGCGT AGAGTTGGCG CTGCGAAGTG GCGTTACATG GCTGCAGTAC
CGCGACAAAA GCAGCAATAC GTCAAAACGC AGCGAACAAG CCCAAGCGCT TAAAGCCCTG
TGCCAAACCT ATAATGCAAA ATTAATTATT AACGACGACA CAGCACTGGC AAAACAAGTG
GGCGCAGATG GCGTGCACCT AGGGCAAACC GACGGCTGTA TTGTCAGCGC CCGCGAATTA
CTGGGGCCGC AGGCCATTAT TGGCTCAACC TGTCACGCTT CGCTCGAACT CGCCGAGCGC
GCACTCGCAC AAGGCTCAAG TTACGTAGCT TTCGGTCGTT TTTTTGCATC TAACACCAAA
CCCAACGCCG CTCCTGCACA ACTTAGCTTA CTGGCACACG CACAGCAGAA ATTCACTTGC
CCAATAGTGG CCATAGGCGG CATAACCCCC AGTAATGGTG CGCAACTTTT GCACGCAGGT
GCAACCACCC TCGCCGTATG CCACAGTCTT TTCGCCGACG ATAATGTAGA ATACCGCGCA
AAATGTTTAT TAGGCTTAAC GCCTAATGCG GAAGACGCGC TTGTAACCAG CTAG
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| Protein sequence | MPHNKHTVYA ITDATLMPTT ASLCHRVELA LRSGVTWLQY RDKSSNTSKR SEQAQALKAL
CQTYNAKLII NDDTALAKQV GADGVHLGQT DGCIVSAREL LGPQAIIGST CHASLELAER
ALAQGSSYVA FGRFFASNTK PNAAPAQLSL LAHAQQKFTC PIVAIGGITP SNGAQLLHAG
ATTLAVCHSL FADDNVEYRA KCLLGLTPNA EDALVTS
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