Gene Sde_0824 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSde_0824 
Symbol 
ID3967722 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharophagus degradans 2-40 
KingdomBacteria 
Replicon accessionNC_007912 
Strand
Start bp1072600 
End bp1074726 
Gene Length2127 bp 
Protein Length708 aa 
Translation table11 
GC content48% 
IMG OID637919886 
Productarginine biosynthesis bifunctional glutamate N-acetyltransferase/amino-acid acetyltransferase 
Protein accessionYP_526298 
Protein GI90020471 
COG category[R] General function prediction only 
COG ID[COG2304] Uncharacterized protein containing a von Willebrand factor type A (vWA) domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.0582843 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTGATT TTGAAAAAGA CCTAAATCAA TTCGACCCGC CCGCGCCCAG CCCACAGGCC 
AAGCGCCGCG CTATAAGCGC TGCTATGCAA GCTTTTGAAA CTGCCCAGAG CAGCTCTCAA
ACTGCCCAGA GCAACTTGGA AACAGCCCAG AGCGCGTCGC AAACGGCTGC GCCAGAAACG
GCGCAAACTA AAAAAAGTAA AATTAATTCA CCTTTGCTCC AAGGATTATT GTTTTGGCGT
CGTCCTACCG ACAAACAAAA CAACAGGAGC AATATTATGT CGCGATTAAC CCAGCGCAGT
TTTACCATGG GCTTAGCATC AGCCTGTGTA CTTACCTTCG GTTTGGTACT TGTATTTCCG
CTATTTTGGC AGCGTAGCGA CGAGCAAATA ATTGTAGATA ATAGCGTGCA AGTACCATCG
GTTACGATAA AAGAGAAAGC CGAAACCAAA ATAGCCGACG TTGCAGAGTC TGAGATGGCT
GTGCCGCCCT CCGCGGCGTT GGAAGAAGTT GTGGTAACAG GTATGCGCAG CTCGGCTGCA
GAATCTGCAA AACTAAGTAA AAAGCCTGCC GCTAGCCAGA GGCAGGTGAG CGCTATTCGC
GCGCAAGACA TTGGTGCCTT ACCGGATCAG TCTAATGCAG TAGCACTCCA GCGTATTGCT
GGTATGCCAG TGGATGGCGA CACAATTGTC GCACCTGCGC CACAAGGCAA TGACAAATTT
GAGCACGTAG AAGAAAACAG CGTAAAAAGT GTTGCTGAAG CACCTGTTTC TACTTTTTCT
ATCGATGTAG ATACAGCCTC TTACTCGTTT GTGCGCCGCC AACTTAACAG CGGCTATTTG
CCAGAAAAAG ATGCGATTCG CGCAGAAGAA TTAATCAATT ATTTTGATTA CAACTACCCA
TTGCCTAGCG ATAGTACTGC ACCGTTCAAG CCAAACATTA CCGTTATAGA TTCGCCTTGG
GCGAAGGGCA AAAAACTTGT GCATATTGGC CTTAAAGGTT ACGACATTGC ACCCGACCAA
AAGCCGCGCA CCAACCTCGT GTTTTTATTG GATGTGTCTG GCTCTATGAA TTCGCAAGAT
AAACTGCCCT TAGTAAAGCA ATCTATGGAG ATGTTGCTAT CTACCCTTAA CCCCGACGAC
ACCGTAGCCA TTGTTGTTTA TGCGGGGGCA GCTGGTACGG TGCTTGAACC AACACCCGCG
AAAGATAAAC AAAAAATACT GTCTGCCATG CAACGCCTGC AAGCGGGGGG CTCTACAGCG
GGTGGCGCTG GCATAGCGCT GGCCTACGAC TTAGCAGAAG CTAACTTTGA TAAAAAAGCC
GTTAACCGAG TAATTTTAGC TACCGATGGT GATTTTAATG TTGGCTCAAC CAATAACGAA
ACGTTGCAGG GCTTTGTAGA GCGCAAGCGC GAAAAAGGCA TATTTTTAAG CGTGTTAGGT
TTTGGCCAAG GCAATTATAA CGATCACTTA ATGCAAACCT TGGCGCAAAA TGGCAACGGC
GTAGCTGCGT ATATAGATAC CGTAAGCGAA GCGCAAAAAG TGTTGGTGCA AGAAGCGTCT
TCGTCGCTGT TTCCTATTGC CAAAGATGTA AAAATTCAAG TGGAGTTTAA CCCCGCCACC
GTGGCCGAAT ACCGTTTAAT AGGCTACGAA ACGCGCGCAT TAAACCGCGA AGATTTTAAC
AACGACGCCG TAGACGCCGG TGATATAGGC GCAGGCCATA CCGTAACCGC AATTTACGAG
ATAACCCCAG TGGGCTCGTC AGCAGTATTA ATTGATGAAT CGCGCTATGC ACAAAAAGAA
AAAGCCAAAG CGCCGACCAA TGCTGAGTAC GGTTTCTTTA AATTGCGCTA CAAGCTACCC
AGCGAAGATA CCTCGCGTTT AATCGAGGCG CCCATCCTGC AACAGCAACC GCTAGTACCC
GCCGAACTTA TGCAAGAGGT TAATTTTTCG GTAGCTGTAG CCGCCTATGC GCAAAAACTA
AAGGGCAGTA ACTTTTTAAA CAAATACAGC TACCACGACA TCATTGCTCT TGCACAAGCC
AGCAAAGGCA GCGATGAATA TGGCTACAGA ACAGAATTTG TACAGCTGGT GCGCAAAGCA
GAACTAGCAG ACGACCTACT ACGCTAA
 
Protein sequence
MTDFEKDLNQ FDPPAPSPQA KRRAISAAMQ AFETAQSSSQ TAQSNLETAQ SASQTAAPET 
AQTKKSKINS PLLQGLLFWR RPTDKQNNRS NIMSRLTQRS FTMGLASACV LTFGLVLVFP
LFWQRSDEQI IVDNSVQVPS VTIKEKAETK IADVAESEMA VPPSAALEEV VVTGMRSSAA
ESAKLSKKPA ASQRQVSAIR AQDIGALPDQ SNAVALQRIA GMPVDGDTIV APAPQGNDKF
EHVEENSVKS VAEAPVSTFS IDVDTASYSF VRRQLNSGYL PEKDAIRAEE LINYFDYNYP
LPSDSTAPFK PNITVIDSPW AKGKKLVHIG LKGYDIAPDQ KPRTNLVFLL DVSGSMNSQD
KLPLVKQSME MLLSTLNPDD TVAIVVYAGA AGTVLEPTPA KDKQKILSAM QRLQAGGSTA
GGAGIALAYD LAEANFDKKA VNRVILATDG DFNVGSTNNE TLQGFVERKR EKGIFLSVLG
FGQGNYNDHL MQTLAQNGNG VAAYIDTVSE AQKVLVQEAS SSLFPIAKDV KIQVEFNPAT
VAEYRLIGYE TRALNREDFN NDAVDAGDIG AGHTVTAIYE ITPVGSSAVL IDESRYAQKE
KAKAPTNAEY GFFKLRYKLP SEDTSRLIEA PILQQQPLVP AELMQEVNFS VAVAAYAQKL
KGSNFLNKYS YHDIIALAQA SKGSDEYGYR TEFVQLVRKA ELADDLLR