Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sde_0803 |
Symbol | |
ID | 3966402 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharophagus degradans 2-40 |
Kingdom | Bacteria |
Replicon accession | NC_007912 |
Strand | - |
Start bp | 1047657 |
End bp | 1049030 |
Gene Length | 1374 bp |
Protein Length | 457 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 637919865 |
Product | HesB/YadR/YfhF |
Protein accession | YP_526277 |
Protein GI | 90020450 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 39 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCCCCAC ACAGCTTTAT CACTAAGGCT CTGCCACACT TAATGCTGAG TTCTATTTTT TGCTTACTAC TTAGTTCATG TTCTACTTTT CAACCACAAA CAGAGCTTGT TATTTCGCGG AGCGAATACG CCAATAAACT GCACGGCTTT TGGCTTGGGC AGTGCATAGC AAATTGGACT GGGCTAGTAA CGGAAATGGA TAAAATAGGT GGCACTGGCC CGCACGGTGA ATTTTATACC CGTGATGACT GGGGCAAGCC CGATCAGCCC AGCATATGGG GCCAAGGCAT ACCCAGTAAC CTCTCCGCCA CCATCGACTT TGTGTTCGAA AACCCAGAGG GTATTTGGGG CAGTGATGAC GATACCGATA TTGAGTATAT TTATCAGCAC CTCTTGGCCA AACATCAAAC CACACGCCTA ACACCGCAGC ACATCCAGCA GGGCTGGCTT ATCCATATAT ACGACGACAG CAATACACCG TTTGTTAATA ACGAAAGCAA ACCCGAGAAT TTCCTGTGGG TATCCAACCA GCAAGCATTT GATTTAATGC GCAACAAAAA TATGCTGCCG CCAGATACCA GCGCGCCAGA AAACAACCCT CACTACGCGA TGATAGACGC TCAATTAACA ACTGAAATTT TTGGCCTATA CGCACCCGGC GCTCCGAACA CCGCGCTTGC AATGGCGCAC TTGCCTATTC GCACCACGGC ACGCACAAAC GCTGCATGGG CGGCGGAGTT TTATGTGGTG ATGTATTCCC TCGCCGCCAC GGTAAATACG CAGCAACCTA TTGGCCCGCA GCTGCGAAAC AACGCAGATA TTGCACGCAC TTATTTACCC GATTCATCTT ACACCGCCAA AATGTACGAC TATGTAAAGC AGCGCTACCA ACAAGGGGCG AAGTGGGAAG CCGTGCGCGA TGAGCTCTAC CGGCGCTACC AAGTAGAGCA AGCAGATGAC TACAACATTA GCAGCCAAAA CCTGTACTGT AACGGCTGCT TTGCATCCGG TATAAACTTT GCCGCAAGTA TTGTAAGCCT GCTTTATGGT GACGGCGACT TAAAGCAAAC CATAAAAATT GCAACCTTAG CAGGATGGGA TTCCGATAAC CCCGCCGCAA CGTGGGGTGG AATGCTTGGC TTTATATTGG GTAAAGATGG CGTAGAACAA GCCTTTAACC GCACCTTTTC GGAAGTGTTT AATATTCACC GCACCCGTGG CGGCTTTGCT AACCAAGGCT TAGACACGTT CACCCGCATG GCCGAAGAAG GCATTAGTAT TGTAGATAGA GTGGTTACAG AAGAACTGCA CGGTAAGATT GATTCAACCA ACAACCTGTA CCTTATTCCT CGCGCAAATA TACAACAGCC TTAA
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Protein sequence | MPPHSFITKA LPHLMLSSIF CLLLSSCSTF QPQTELVISR SEYANKLHGF WLGQCIANWT GLVTEMDKIG GTGPHGEFYT RDDWGKPDQP SIWGQGIPSN LSATIDFVFE NPEGIWGSDD DTDIEYIYQH LLAKHQTTRL TPQHIQQGWL IHIYDDSNTP FVNNESKPEN FLWVSNQQAF DLMRNKNMLP PDTSAPENNP HYAMIDAQLT TEIFGLYAPG APNTALAMAH LPIRTTARTN AAWAAEFYVV MYSLAATVNT QQPIGPQLRN NADIARTYLP DSSYTAKMYD YVKQRYQQGA KWEAVRDELY RRYQVEQADD YNISSQNLYC NGCFASGINF AASIVSLLYG DGDLKQTIKI ATLAGWDSDN PAATWGGMLG FILGKDGVEQ AFNRTFSEVF NIHRTRGGFA NQGLDTFTRM AEEGISIVDR VVTEELHGKI DSTNNLYLIP RANIQQP
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